RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 TYW3Q6IPR3 259 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 TRNP1Q6NT89 227 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 ISCA2Q86U28 154 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 THOC6Q86W42 341 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 MTURNQ8N3F0 131 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 METTL13Q8N6R0 699 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF740Q8NDX6 193 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 DOK4Q8TEW6 326 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 RITA1Q96K30 269 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 HSFY1Q96LI6 401 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF681Q96N22 645 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 BBC3Q96PG8 261 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 SCGB3A2Q96PL1 93 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 OR8B4Q96RC9 309 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 AGMATQ9BSE5 352 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 MEGF9Q9H1U4 602 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 GLTPQ9NZD2 209 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 WRAP73Q9P2S5 460 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 UTP11Q9Y3A2 253 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 ALG5Q9Y673 324 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 TAF1LQ8IZX4 1826 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 A0A1B0GTL3 188 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 TRABD2BA6NFA1 517 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 METTL15A6NJ78 407 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNHIT1O43257 154 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 ERI3O43414 337 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 SULT1C4O75897 302 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 IFNA4P05014 189 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 LGALS2P05162 132 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 CTSLP07711 333 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 ACRV1P26436 265 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 BTDP43251 543 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 RPL32P62910 135 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 HSF1Q00613 529 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 SP4Q02446 784 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 CCDC6Q16204 474 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 ADAMTSL5Q6ZMM2 481 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 PRSS48Q7RTY5 328 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 BPIFB2Q8N4F0 458 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF561Q8N587 486 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 MRPS31Q92665 395 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 SFRP2Q96HF1 295 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 RBP7Q96R05 134 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 OVOL2Q9BRP0 275 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 C2orf88Q9BSF0 95 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 HES7Q9BYE0 225 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 YTHDF1Q9BYJ9 559 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 SPNS1Q9H2V7 528 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 Q9HAA7 133 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 ZBTB20Q9HC78 741 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 MLXQ9UH92 298 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 RWDD2AQ9UIY3 292 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 ELF5Q9UKW6 265 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 NID2Q14112 1375 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 CARMIL3Q8ND23 1372 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 MED23Q9ULK4 1368 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 WNK3Q9BYP7 1800 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF623O75123 536 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 IFNA2P01563 188 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 CST2P09228 141 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 COX4I1P13073 169 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 OGNP20774 298 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 TTPAP49638 278 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 CDH11P55287 796 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF121P58317 390 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 UNC50Q53HI1 259 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 RPL13AP3Q6NVV1 102 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 FAM199XQ6PEV8 388 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 NIT1Q86X76 327 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 SPNS2Q8IVW8 549 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 CPNE9Q8IYJ1 553 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 RNF113BQ8IZP6 322 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 ATPAF2Q8N5M1 289 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 CLDN22Q8N7P3 220 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 HSD17B11Q8NBQ5 300 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 KLHDC9Q8NEP7 349 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 OR2T33Q8NG76 320 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 DNAJA3Q96EY1 480 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 OR10C1Q96KK4 312 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 AMBNQ9NP70 447 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 TREM2Q9NZC2 230 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 CD84Q9UIB8 345 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 KCNS2Q9ULS6 477 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 HHLA2Q9UM44 414 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 RPL26L1Q9UNX3 145 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 TESMINQ9Y4I5 508 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 OR51B4Q9Y5P0 310 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 NUBP2Q9Y5Y2 271 aa4.43□□□□□ -1.7
ECHDC1-222ENST00000531967 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 GLTPD2A6NH11 291 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 SIGLEC16A6NMB1 481 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 OR11H12B2RN74 326 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 NEDD8-MDP1E9PL57 170 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 MRPS12O15235 138 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 IFI30P13284 250 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 CD1EP15812 388 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 HTR1DP28221 377 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 IL12AP29459 219 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF85Q03923 595 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms