RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 CTPS2Q9NRF8 586 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 POLE3Q9NRF9 147 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 SLC35A3Q9Y2D2 325 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 SLC9A8Q9Y2E8 581 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 HDGFL3Q9Y3E1 203 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 WDR45Q9Y484 360 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 FKBP7Q9Y680 259 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 ANXA2P2A6NMY6 339 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 ATP6V1G2-DDX39BF2Z307 99 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 EIF1BO60739 113 aaKnown RBP5.53□□□□□ -1.52
CSDE1-213ENST00000530784 BCAS1O75363 584 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-213ENST00000530784 GUSBP08236 651 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 CCNA2P20248 432 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 USF1P22415 310 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-213ENST00000530784 KHKP50053 298 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 CLDN8P56748 225 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 OR2B6P58173 313 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 TGFBR3Q03167 851 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 GGTLC2Q14390 218 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 MAPK14Q16539 360 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 FAM174BQ3ZCQ3 159 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 C1QTNF12Q5T7M4 302 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 C9orf135Q5VTT2 229 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 OR4F3Q6IEY1 312 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 EMBQ6PCB8 327 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 ARFGAP2Q8N6H7 521 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 EIF1ADQ8N9N8 165 aaKnown RBP5.53□□□□□ -1.52
CSDE1-213ENST00000530784 OR52E4Q8NGH9 312 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 OR4A15Q8NGL6 344 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 C11orf45Q8TAV5 145 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 MIPOL1Q8TD10 442 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 RAB8BQ92930 207 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 DDIT4LQ96D03 193 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 ARL5BQ96KC2 179 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 C1QTNF6Q9BXI9 259 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 OR11A1Q9GZK7 315 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 EXOSC3Q9NQT5 275 aaKnown RBP5.53□□□□□ -1.52
CSDE1-213ENST00000530784 SLC17A5Q9NRA2 495 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 SLC17A7Q9P2U7 560 aa5.53□□□□□ -1.52
CSDE1-213ENST00000530784 CHD3Q12873 2000 aaKnown RBP5.53□□□□□ -1.52
CSDE1-213ENST00000530784 TMED7-TICAM2A0A0A6YYA0 188 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 PDLIM1O00151 329 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 NDUFS8O00217 210 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 ZNF208O43345 1280 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 SPAG7O75391 227 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 LY6HO94772 140 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 NUDT17P0C025 328 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 OR12D1P0DN82 309 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 UQCRBP14927 111 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 HNF1AP20823 631 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 UQCRC2P22695 453 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 IGFBP5P24593 272 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 CHI3L1P36222 383 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-213ENST00000530784 IDH2P48735 452 aaKnown RBP5.52□□□□□ -1.53
CSDE1-213ENST00000530784 POLR2HP52434 150 aaKnown RBP5.52□□□□□ -1.53
CSDE1-213ENST00000530784 PRPS1P60891 318 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 SNRPD2P62316 118 aaKnown RBP5.52□□□□□ -1.53
CSDE1-213ENST00000530784 SLC35A1P78382 337 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 H3F3AP84243 136 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 EMX2Q04743 252 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 FUT5Q11128 374 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 GPAT3Q53EU6 434 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 TSPO2Q5TGU0 170 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 ANXA8L1Q5VT79 327 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 FAM166AQ6J272 317 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 TNFAIP8L2Q6P589 184 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-213ENST00000530784 FRRS1Q6ZNA5 592 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 HMGN2P46Q86SG4 172 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 ANKRD46Q86W74 232 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 SPAG16Q8N0X2 631 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 Q8N377 158 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 RIBC1Q8N443 379 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-213ENST00000530784 ARIH2OSQ8N7S6 290 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 WDR31Q8NA23 367 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 OR8J2Q8NGG1 315 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 TCP10LQ8TDR4 215 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 TMEM45BQ96B21 275 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 ROPN1LQ96C74 230 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 FAM218AQ96MZ4 157 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 C19orf24Q9BVV8 132 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 DPY30Q9C005 99 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 MYOZ1Q9NP98 299 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-213ENST00000530784 SLC7A10Q9NS82 523 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 MOKQ9UQ07 419 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 TRAPPC4Q9Y296 219 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 TMED7Q9Y3B3 224 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 FLVCR1Q9Y5Y0 555 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 MXRA5Q9NR99 2828 aa5.52□□□□□ -1.53
CSDE1-213ENST00000530784 ARID1AO14497 2285 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 CSPG4Q6UVK1 2322 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 TMEM72A0PK05 275 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 CLDN24A6NM45 220 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 CPSF4O95639 269 aaKnown RBP5.51□□□□□ -1.53
CSDE1-213ENST00000530784 BPGMP07738 259 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 IFFO1Q0D2I5 559 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 GNA13Q14344 377 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 SLC17A1Q14916 467 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 CARTPTQ16568 116 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 SMU1Q2TAY7 513 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 FAM120AOSQ5T036 256 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms