RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 RFLNBQ8N5W9 214 aa10.72□□□□□ -0.69
CCDC90B-216ENST00000529856 OR10AD1Q8NGE0 317 aa10.72□□□□□ -0.69
CCDC90B-216ENST00000529856 HPS1Q92902 700 aa10.72□□□□□ -0.69
CCDC90B-216ENST00000529856 REEP6Q96HR9 211 aa10.72□□□□□ -0.69
CCDC90B-216ENST00000529856 MEGF10Q96KG7 1140 aa10.72□□□□□ -0.69
CCDC90B-216ENST00000529856 SLC22A4Q9H015 551 aa10.72□□□□□ -0.69
CCDC90B-216ENST00000529856 OR10A2Q9H208 303 aa10.72□□□□□ -0.69
CCDC90B-216ENST00000529856 RGCCQ9H4X1 137 aa10.72□□□□□ -0.69
CCDC90B-216ENST00000529856 FAM118AQ9NWS6 357 aa10.72□□□□□ -0.69
CCDC90B-216ENST00000529856 LOC100130705A0A1B0GUX0 176 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 TMEM269A0A1B0GVZ9 245 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 F5H5P2 479 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 DLGAP1O14490 977 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 WNT9BO14905 357 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 SLC16A6O15403 523 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 GMDSO60547 372 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 OR2T7P0C7T2 308 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 GABRB1P18505 474 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 CA6P23280 308 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 CFL1P23528 166 aaKnown RBP10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 IL2RGP31785 369 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 CXCR4P61073 352 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 EGR3Q06889 387 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 POU4F2Q12837 409 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 MEDAGQ5VYS4 303 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 NIPBLQ6KC79 2804 aaeCLIP10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 ZNF322Q6U7Q0 402 aaPredicted RBP10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 OR56B2PQ8NGI1 322 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 OR2T27Q8NH04 317 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 CLDND2Q8NHS1 167 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 RAB1CQ92928 201 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 MSI2Q96DH6 328 aaKnown RBP10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 C1orf159Q96HA4 380 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 RDH12Q96NR8 316 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 SOX7Q9BT81 388 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 TTTY10Q9BZA0 68 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 GCM1Q9NP62 436 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 TMEM106BQ9NUM4 274 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 MRPL15Q9P015 296 aaKnown RBP10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 IKZF2Q9UKS7 526 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 PPP1R3CQ9UQK1 317 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 NOP16Q9Y3C1 178 aaKnown RBP10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 WIPI2Q9Y4P8 454 aa10.71□□□□□ -0.69
CCDC90B-216ENST00000529856 SETD2Q9BYW2 2564 aaPredicted RBP10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 hCG_38984A0A1B0GV85 526 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 MAGEB4O15481 346 aaPredicted RBP10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 APOL3O95236 402 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 ATP6V1E1P36543 226 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 CD200P41217 278 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 MTNR1AP48039 350 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 GSK3AP49840 483 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 MMP16P51512 607 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 RIDAP52758 137 aaKnown RBP10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 LMO4P61968 165 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 MVKQ03426 396 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 HNRNPA0Q13151 305 aaKnown RBP10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 MAB21L1Q13394 359 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 OR8G1Q15617 311 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 LRRC36Q1X8D7 754 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 C6orf52Q5T4I8 152 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 AVPI1Q5T686 147 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 LPCAT4Q643R3 524 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 GALNT4Q8N4A0 578 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 CELF2-AS1Q8N7Q2 184 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 OR8B12Q8NGG6 310 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 RHOXF1Q8NHV9 184 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 TIMD4Q96H15 378 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 LYZL4Q96KX0 146 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 APOL4Q9BPW4 351 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 NARFLQ9H6Q4 476 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 C8orf4Q9NR00 106 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 YAE1D1Q9NRH1 226 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 FAM206AQ9NX38 181 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 DCAF16Q9NXF7 216 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 SMPD3Q9NY59 655 aaPredicted RBP10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 AASSQ9UDR5 926 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 MRM2Q9UI43 246 aaKnown RBP10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 ZNF391Q9UJN7 358 aa10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.7□□□□□ -0.7
CCDC90B-216ENST00000529856 HIVEP2P31629 2446 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 NSD1Q96L73 2696 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 A0A0U1RQV5 110 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 LOC100289279A0A1B0GTE1 492 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 A0A1W2PQL4 384 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 SNTNA6NMZ2 147 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 ANKRD30BLA7E2S9 258 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 A8MV72 311 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 INAFM1C9JVW0 142 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 IFNL4K9M1U5 179 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 MPZL2O60487 215 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 SRSF10O75494 262 aaKnown RBP10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 PNPP00491 289 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 HOXB4P17483 251 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 GATA4P43694 442 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 RIPPLY3P57055 190 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 ELF3P78545 371 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 OR8B8Q15620 311 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 GFOD2Q3B7J2 385 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 ZNF829Q3KNS6 432 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 ZNF684Q5T5D7 378 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms