RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 SYS1Q8N2H4 156 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 ZNF786Q8N393 782 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 NINJ1Q92982 152 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 RNF166Q96A37 237 aaPredicted RBP11.97□□□□□ -0.49
USF1-209ENST00000529476 SPSB4Q96A44 273 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 PELI1Q96FA3 418 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 MRPL48Q96GC5 212 aaKnown RBP11.97□□□□□ -0.49
USF1-209ENST00000529476 REEP6Q96HR9 211 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 CXorf56Q9H5V9 222 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 G6PC2Q9NQR9 355 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 PAK1IP1Q9NWT1 392 aaPredicted RBP11.97□□□□□ -0.49
USF1-209ENST00000529476 CLEC2DQ9UHP7 191 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 OR52A1Q9UKL2 312 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 EXOSC1Q9Y3B2 195 aaKnown RBP11.97□□□□□ -0.49
USF1-209ENST00000529476 PMF1-BGLAPU3KQ54 211 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 TTRP02766 147 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 CCDC159P0C7I6 412 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 NAT2P11245 290 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 BMP4P12644 408 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 PPOXP50336 477 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 MMP15P51511 669 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 DEFB113Q30KQ7 82 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 BCL2L15Q5TBC7 163 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 OR2G6Q5TZ20 316 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 CATSPERDQ86XM0 798 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 BHLHE23Q8NDY6 225 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 MYDGFQ969H8 173 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 MBD6Q96DN6 1003 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 LYZL4Q96KX0 146 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 MYCBPQ99417 103 aaPredicted RBP11.96□□□□□ -0.49
USF1-209ENST00000529476 VRK1Q99986 396 aaPredicted RBP11.96□□□□□ -0.49
USF1-209ENST00000529476 SOX7Q9BT81 388 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 TMUB1Q9BVT8 246 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 REPIN1Q9BWE0 567 aaKnown RBP11.96□□□□□ -0.49
USF1-209ENST00000529476 BEX4Q9NWD9 120 aaPredicted RBP11.96□□□□□ -0.49
USF1-209ENST00000529476 ERVK-18Q9QC07 812 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 NUFIP1Q9UHK0 495 aaKnown RBP11.96□□□□□ -0.49
USF1-209ENST00000529476 SLC22A13Q9Y226 551 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 TPRKBQ9Y3C4 175 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 SNX5Q9Y5X3 404 aa11.96□□□□□ -0.49
USF1-209ENST00000529476 hCG_38984A0A1B0GV85 526 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 GGT3PA6NGU5 568 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 ZSCAN5BA6NJL1 495 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 IQCF6A8MYZ5 107 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 E9PI62 339 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 H7C417 338 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 LILRA1O75019 489 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 NDUFS7O75251 213 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 CDK1P06493 297 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 CD99P14209 185 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 CRHBPP24387 322 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 KIR3DL2P43630 455 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 PTH2RP49190 550 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 SLC35A2P78381 396 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 FAM3AP98173 230 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 MED21Q13503 144 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 MOGQ16653 247 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 ODF4Q2M2E3 257 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 WDR38Q5JTN6 314 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 RBM48Q5RL73 367 aaKnown RBP11.95□□□□□ -0.5
USF1-209ENST00000529476 ELMOD2Q8IZ81 293 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 PRSS35Q8N3Z0 413 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 KLHL36Q8N4N3 616 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 OR51E1Q8TCB6 317 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 SPRYD4Q8WW59 207 aaPredicted RBP11.95□□□□□ -0.5
USF1-209ENST00000529476 PERPQ96FX8 193 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 TPK1Q9H3S4 243 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 RGCCQ9H4X1 137 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 DUSP21Q9H596 190 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 OPA3Q9H6K4 179 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 MOB1AQ9H8S9 216 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 MSL2Q9HCI7 577 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 ZNF701Q9NV72 531 aaPredicted RBP11.95□□□□□ -0.5
USF1-209ENST00000529476 CHCHD3Q9NX63 227 aaKnown RBP11.95□□□□□ -0.5
USF1-209ENST00000529476 GPR160Q9UJ42 338 aa11.95□□□□□ -0.5
USF1-209ENST00000529476 CAB39Q9Y376 341 aaPredicted RBP11.95□□□□□ -0.5
USF1-209ENST00000529476 A0A0U1RQV5 110 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 PLSCR5A0PG75 271 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 CD300LBA8K4G0 201 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 MT-ND5P03915 603 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 HTR1AP08908 422 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 PAX1P15863 534 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 SELEP16581 610 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 GSK3AP49840 483 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 ZNF81P51508 661 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 NANOS3P60323 173 aaKnown RBP11.94□□□□□ -0.5
USF1-209ENST00000529476 TNK1Q13470 666 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 FDX2Q6P4F2 183 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 TMPRSS11AQ6ZMR5 421 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 Q6ZR03 302 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 COMMD2Q86X83 199 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 OR8G5Q8NG78 346 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 OR56B2PQ8NGI1 322 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 OR2G2Q8NGZ5 317 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 TRMT61AQ96FX7 289 aaKnown RBP11.94□□□□□ -0.5
USF1-209ENST00000529476 SORCS2Q96PQ0 1159 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 GSX2Q9BZM3 304 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 MS4A5Q9H3V2 200 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 GPR84Q9NQS5 396 aa11.94□□□□□ -0.5
USF1-209ENST00000529476 FBXO9Q9UK97 447 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 549.3 ms