RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 FABP1P07148 127 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 PET100P0DJ07 73 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 CYBAP13498 195 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 CXCR2P25025 360 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 LOXP28300 417 aaPredicted RBP4.44□□□□□ -1.7
PCF11-202ENST00000528336 LEPP41159 167 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 MGAT3Q09327 533 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 DPYSL3Q14195 570 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 EMC2Q15006 297 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 UBE2SQ16763 222 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 ATP6V1FQ16864 119 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 AKIRIN2Q53H80 203 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 IDNKQ5T6J7 187 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 SEL1L2Q5TEA6 688 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 OR2G6Q5TZ20 316 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 SYPL2Q5VXT5 272 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 REP15Q6BDI9 236 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 Q6ZR54 194 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 SSX6Q7RTT6 188 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 ENTHD1Q8IYW4 607 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 CMTM1Q8IZ96 169 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 BLIDQ8IZY5 108 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 CCNYL1Q8N7R7 359 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 VN1R2Q8NFZ6 395 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 OR1S2Q8NGQ3 325 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 OR5K2Q8NHB8 316 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 FAF2Q96CS3 445 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 ITCHQ96J02 903 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 PACRGQ96M98 296 aaPredicted RBP4.44□□□□□ -1.7
PCF11-202ENST00000528336 PRAP1Q96NZ9 151 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 SERPINB12Q96P63 405 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 RNF2Q99496 336 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 APOL2Q9BQE5 337 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 UTP23Q9BRU9 249 aaKnown RBP4.44□□□□□ -1.7
PCF11-202ENST00000528336 Q9HAA7 133 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 BABAM2Q9NXR7 383 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 TAS2R16Q9NYV7 291 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 WRAP73Q9P2S5 460 aaPredicted RBP4.44□□□□□ -1.7
PCF11-202ENST00000528336 FBXL3Q9UKT7 428 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 CENPFP49454 3210 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 PLXNB2O15031 1838 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 MGAMO43451 1857 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 A0A1W2PQL4 384 aaPredicted RBP4.43□□□□□ -1.7
PCF11-202ENST00000528336 SLC5A10A0PJK1 596 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 ARGFXA6NJG6 315 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 A8MX80 341 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 H0YJX3 145 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 PPP1R2P9O14990 202 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 UGT2B17O75795 530 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 LYPD3O95274 346 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 PSMG1O95456 288 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 OXTP01178 125 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 COX5BP10606 129 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 CCL5P13501 91 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 ABOP16442 354 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 MGMTP16455 207 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 CMA1P23946 247 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 SAA4P35542 130 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 KPNA2P52292 529 aaKnown RBP4.43□□□□□ -1.7
PCF11-202ENST00000528336 UBE2KP61086 200 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 RPS14P62263 151 aaKnown RBP4.43□□□□□ -1.7
PCF11-202ENST00000528336 CCL7P80098 99 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 ZNF33BQ06732 778 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 ABRAXAS2Q15018 415 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 SF3A2Q15428 464 aaKnown RBP4.43□□□□□ -1.7
PCF11-202ENST00000528336 TRMT5Q32P41 509 aaKnown RBP4.43□□□□□ -1.7
PCF11-202ENST00000528336 SDHAF4Q5VUM1 108 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 COX15Q7KZN9 410 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 PGAM4Q8N0Y7 254 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 MDS2Q8NDY4 140 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 OR2L5Q8NG80 312 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 OR6T1Q8NGN1 323 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 OR5AK3PQ8NH89 298 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 CRYGNQ8WXF5 182 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 OR8D1Q8WZ84 308 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 TADA1Q96BN2 335 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 S100PBPQ96BU1 408 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 MICU1Q9BPX6 476 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 ARMC7Q9H6L4 198 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 ELL3Q9HB65 397 aaPredicted RBP4.43□□□□□ -1.7
PCF11-202ENST00000528336 RETNQ9HD89 108 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 DHRS4-AS1Q9P1J3 65 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 ARMCX1Q9P291 453 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 ZNF107Q9UII5 783 aaPredicted RBP4.43□□□□□ -1.7
PCF11-202ENST00000528336 LSM7Q9UK45 103 aaKnown RBP4.43□□□□□ -1.7
PCF11-202ENST00000528336 DOCK3Q8IZD9 2030 aa4.43□□□□□ -1.7
PCF11-202ENST00000528336 ZNF318Q5VUA4 2279 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 TCRBV9S1A1TA0A576 114 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 PSMB11A5LHX3 300 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 TMEM238C9JI98 176 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 K7EN84 100 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 hCG_2039718K7EN88 272 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 SLC16A4O15374 487 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 SLC31A1O15431 190 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 TNFAIP8O95379 198 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 IFNA5P01569 189 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 RHOCP08134 193 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 COX5AP20674 150 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 ZP3P21754 424 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 DDOSTP39656 456 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms