RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 SLC16A6O15403 523 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 TBX1O43435 398 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 GMDSO60547 372 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 GABRB1P18505 474 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 CFL1P23528 166 aaKnown RBP10.94□□□□□ -0.66
CTSB-209ENST00000525315 IL2RGP31785 369 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 SRP9P49458 86 aaKnown RBP10.94□□□□□ -0.66
CTSB-209ENST00000525315 CXCR4P61073 352 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 LMO4P61968 165 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 EGR3Q06889 387 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 POU4F2Q12837 409 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 MAB21L1Q13394 359 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 TIGD6Q17RP2 521 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 MEDAGQ5VYS4 303 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 OR51G2Q8NGK0 314 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 CLDND2Q8NHS1 167 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 RHOXF1Q8NHV9 184 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 RAB1CQ92928 201 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 RFKQ969G6 155 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 MSI2Q96DH6 328 aaKnown RBP10.94□□□□□ -0.66
CTSB-209ENST00000525315 PGAM5Q96HS1 289 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 RDH12Q96NR8 316 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 SOX7Q9BT81 388 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 RGCCQ9H4X1 137 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 GCM1Q9NP62 436 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 BRD7Q9NPI1 651 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 TMEM106BQ9NUM4 274 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 FAM206AQ9NX38 181 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 IMPAD1Q9NX62 359 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 TREM2Q9NZC2 230 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 GMPPBQ9Y5P6 360 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 SVEP1Q4LDE5 3571 aa10.94□□□□□ -0.66
CTSB-209ENST00000525315 SONP18583 2426 aaKnown RBP10.94□□□□□ -0.66
CTSB-209ENST00000525315 C2CD3Q4AC94 2353 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 hCG_38984A0A1B0GV85 526 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 TMEM269A0A1B0GVZ9 245 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 ZNF670-ZNF695F2Z2N8 137 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 F5H5P2 479 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 IFNL4K9M1U5 179 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 PSMD9O00233 223 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 ENTPD6O75354 484 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 SRSF10O75494 262 aaKnown RBP10.93□□□□□ -0.66
CTSB-209ENST00000525315 PTBP3O95758 552 aaKnown RBP10.93□□□□□ -0.66
CTSB-209ENST00000525315 HLA-DPB1P04440 258 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 OR2T7P0C7T2 308 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 HOXB4P17483 251 aaPredicted RBP10.93□□□□□ -0.66
CTSB-209ENST00000525315 CA6P23280 308 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 CD200P41217 278 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 GATA4P43694 442 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 GSK3AP49840 483 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 MMP16P51512 607 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 RIDAP52758 137 aaKnown RBP10.93□□□□□ -0.66
CTSB-209ENST00000525315 RIPPLY3P57055 190 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 PSMA6P60900 246 aaKnown RBP10.93□□□□□ -0.66
CTSB-209ENST00000525315 RCN1Q15293 331 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 C6orf52Q5T4I8 152 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 ZNF322Q6U7Q0 402 aaPredicted RBP10.93□□□□□ -0.66
CTSB-209ENST00000525315 KLBQ86Z14 1044 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 RFLNBQ8N5W9 214 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 OR10AD1Q8NGE0 317 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 OR8B12Q8NGG6 310 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 OR2T27Q8NH04 317 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 ITFG2Q969R8 447 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 TIMD4Q96H15 378 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 APOL4Q9BPW4 351 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 C8orf4Q9NR00 106 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 YAE1D1Q9NRH1 226 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 ZNF391Q9UJN7 358 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.93□□□□□ -0.66
CTSB-209ENST00000525315 PPP1R3CQ9UQK1 317 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 NOP16Q9Y3C1 178 aaKnown RBP10.93□□□□□ -0.66
CTSB-209ENST00000525315 WIPI2Q9Y4P8 454 aa10.93□□□□□ -0.66
CTSB-209ENST00000525315 A0A0U1RQV5 110 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 A0A1W2PQL4 384 aaPredicted RBP10.92□□□□□ -0.66
CTSB-209ENST00000525315 INAFM1C9JVW0 142 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 TMEM178BH3BS89 294 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 J3QRE1 110 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 PMELP40967 661 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 MTNR1AP48039 350 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 MVKQ03426 396 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 OR8G1Q15617 311 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 OR8B8Q15620 311 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 ZNF181Q2M3W8 571 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 ZNF684Q5T5D7 378 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 LPCAT4Q643R3 524 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 KRT74Q7RTS7 529 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 PEG10Q86TG7 708 aaKnown RBP10.92□□□□□ -0.66
CTSB-209ENST00000525315 ENTHD1Q8IYW4 607 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 PACRGLQ8N7B6 248 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 SPERTQ8NA61 448 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 PLPP7Q8NBV4 271 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 OR56B2PQ8NGI1 322 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 ERGIC1Q969X5 290 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 LYZL4Q96KX0 146 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 SIGLEC11Q96RL6 698 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 TMEM160Q9NX00 188 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 DCAF16Q9NXF7 216 aa10.92□□□□□ -0.66
CTSB-209ENST00000525315 SMPD3Q9NY59 655 aaPredicted RBP10.92□□□□□ -0.66
CTSB-209ENST00000525315 MRM2Q9UI43 246 aaKnown RBP10.92□□□□□ -0.66
CTSB-209ENST00000525315 NPTNQ9Y639 398 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms