RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 LCE6AA0A183 80 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 A0A1B0GX78 115 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 A0A1W2PPE3 182 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 TMEM213A2RRL7 107 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 HYKKA2RU49 373 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 FRG2CA6NGY1 282 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 J3KR12 359 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 AZIN1O14977 448 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 SLC16A5O15375 505 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 HSPA12AO43301 675 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 KIAA0513O60268 411 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 SLPIP03973 132 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 SOD3P08294 240 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 ETFAP13804 333 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 HOXB6P17509 224 aaKnown RBP4.39□□□□□ -1.71
PABPC1-223ENST00000523636 PSMB5P28074 263 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 OPRM1P35372 400 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 GSSP48637 474 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 ATP1B3P54709 279 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 GNG2P59768 71 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 ESRRGP62508 458 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 HERVK_113P63132 956 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 ERVK-25P63136 954 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 ACVR1Q04771 509 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 BNIP2Q12982 314 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 CRMP1Q14194 572 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 NPTX1Q15818 432 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 LRRC36Q1X8D7 754 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 NDUFAF6Q330K2 333 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 TECRLQ5HYJ1 363 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 SIRPB2Q5JXA9 342 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 FAM182AQ5T1J6 154 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 KPRPQ5T749 579 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-223ENST00000523636 HENMT1Q5T8I9 393 aaKnown RBP4.39□□□□□ -1.71
PABPC1-223ENST00000523636 SLX4IPQ5VYV7 408 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 LPCAT4Q643R3 524 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 SUMO4Q6EEV6 95 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 TMPRSS11BQ86T26 416 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 FUNDC1Q8IVP5 155 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 ENTHD1Q8IYW4 607 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 C1orf52Q8N6N3 182 aaKnown RBP4.39□□□□□ -1.71
PABPC1-223ENST00000523636 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-223ENST00000523636 NECAP1Q8NC96 275 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 FAM98AQ8NCA5 519 aaKnown RBP4.39□□□□□ -1.71
PABPC1-223ENST00000523636 ADPRHL1Q8NDY3 354 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 OR5M8Q8NGP6 311 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 OR52I2Q8NH67 350 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 FLVCR1-AS1Q8TAF5 88 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 EME1Q96AY2 570 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 PHF21AQ96BD5 680 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 C10orf35Q96D05 121 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 OMA1Q96E52 524 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 RNF145Q96MT1 663 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 WFIKKN1Q96NZ8 548 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 SORCS2Q96PQ0 1159 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 OR5B2Q96R09 309 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 COPS8Q99627 209 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 KLHDC3Q9BQ90 382 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 TIMM29Q9BSF4 260 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 OSBPL11Q9BXB4 747 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 ERVK-6Q9BXR3 956 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 MAP1LC3CQ9BXW4 147 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 MRPS26Q9BYN8 205 aaKnown RBP4.39□□□□□ -1.71
PABPC1-223ENST00000523636 KLK15Q9H2R5 256 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF385DQ9H6B1 395 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 SLA2Q9H6Q3 261 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 PPP1R3EQ9H7J1 279 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 DEPPQ9NTK1 212 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 EXD2Q9NVH0 621 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 ASIC5Q9NY37 505 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 TAS2R13Q9NYV9 303 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 TAS2R9Q9NYW1 312 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 SPRR3Q9UBC9 169 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF629Q9UEG4 869 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-223ENST00000523636 NUP50Q9UKX7 468 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF490Q9ULM2 529 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-223ENST00000523636 WDR45Q9Y484 360 aa4.39□□□□□ -1.71
PABPC1-223ENST00000523636 EXPH5Q8NEV8 1989 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 NINQ8N4C6 2090 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 IGLV3-12A0A075B6K2 115 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 IGHV3-20A0A0C4DH32 117 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 A0A0G2JMM0 328 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 A0A1W2PPB8 328 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 GNG14A0A1W2PPG7 69 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 A0A1W2PRS3 328 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 A8MT66 165 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 KIR3DP1A8MWS1 328 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 NPIPA7E9PJI5 369 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 G3V4G9 280 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 H3BNX3 289 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 CCSO14618 274 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 ACOT8O14734 319 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 MRASO14807 208 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 XRCC2O43543 280 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 WDR1O75083 606 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 LDB3O75112 727 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 ETHE1O95571 254 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 DHFRP00374 187 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 IGHG3P01860 377 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 GAPDHP04406 335 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms