RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 OR1Q1Q15612 314 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 EMC4Q5J8M3 183 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 FBXW9Q5XUX1 488 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 OR4C11Q6IEV9 310 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 FBXW12Q6X9E4 464 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 D2HGDHQ8N465 521 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 OR51A2Q8NGJ7 313 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 PCBD2Q9H0N5 130 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 SLC35B3Q9H1N7 401 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 ADAP2Q9NPF8 381 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 RXFP3Q9NSD7 469 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 CKLFQ9UBR5 152 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 SLC25A13Q9UJS0 675 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 OSGIN2Q9Y236 505 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 TRAV1-1A0A0B4J248 108 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 SFT2D2O95562 160 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 CHRM2P08172 466 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 CEACAM1P13688 526 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 MC3RP41968 323 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 ACAA2P42765 397 aaKnown RBP7.48□□□□□ -1.21
CSMD1-213ENST00000523488 SMAD3P84022 425 aaKnown RBP7.48□□□□□ -1.21
CSMD1-213ENST00000523488 ALG10BQ5I7T1 473 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 C1orf189Q5VU69 101 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 SLC25A26Q70HW3 274 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 COX14Q96I36 57 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 Q96M85 177 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 DCBLD2Q96PD2 775 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 SRMSQ9H3Y6 488 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 ADAMTS9Q9P2N4 1935 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF727A8MUV8 499 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 TRGC2P03986 189 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 CLLU1OSQ5K130 101 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 LANCL3Q6ZV70 420 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF429Q86V71 674 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 LFNGQ8NES3 379 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 ABHD5Q8WTS1 349 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 IGSF21Q96ID5 467 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 NKX3-1Q99801 234 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-213ENST00000523488 HIST1H2BLQ99880 126 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 CYP8B1Q9UNU6 501 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF780BQ9Y6R6 833 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 TLCD2A6NGC4 264 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 K7EP13 123 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 RAB27BO00194 218 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 EREGO14944 169 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 DFFBO76075 338 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 IGHMP01871 453 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 HIST1H1CP16403 213 aaKnown RBP7.47□□□□□ -1.21
CSMD1-213ENST00000523488 RAP1BP61224 184 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 RASGEF1BQ0VAM2 473 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 DUSP5Q16690 384 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 LDLRAD1Q5T700 205 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 RPUSD3Q6P087 351 aaKnown RBP7.47□□□□□ -1.21
CSMD1-213ENST00000523488 OPN5Q6U736 354 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 FAM219AQ8IW50 185 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 OR13C3Q8NGS6 347 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF563Q8TA94 476 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF721Q8TF20 911 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 DTD2Q96FN9 168 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 ULBP3Q9BZM4 244 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 CAPN10Q9HC96 672 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 SUSD2Q9UGT4 822 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 COLEC10Q9Y6Z7 277 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 K7EPK0 472 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 JTBO76095 146 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 ABLIM3O94929 683 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 SCAF4O95104 1147 aaKnown RBP7.47□□□□□ -1.21
CSMD1-213ENST00000523488 CSF2RAP15509 400 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 GLIPR1P48060 266 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 SAPCD1Q5SSQ6 148 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 RNF44Q7L0R7 432 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 SLC35E3Q7Z769 313 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 PRSS58Q8IYP2 241 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 FAM71E2Q8N5Q1 922 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 C10orf53Q8N6V4 93 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF283Q8N7M2 679 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 KCNE4Q8WWG9 221 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 DDIT4LQ96D03 193 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 MS4A6EQ96DS6 147 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 ARSGQ96EG1 525 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 SHDQ96IW2 340 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 C4orf45Q96LM5 186 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 OR5AC2Q9NZP5 309 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 HCSTQ9UBK5 93 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 BORCS7-ASMTA0A0B4J1R7 106 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 RRP8O43159 456 aaKnown RBP7.47□□□□□ -1.21
CSMD1-213ENST00000523488 DLEU1O43261 78 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 HSPA12AO43301 675 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 DUSP11O75319 330 aaKnown RBP7.47□□□□□ -1.21
CSMD1-213ENST00000523488 DEDDO75618 318 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 DBIP07108 87 aaKnown RBP7.47□□□□□ -1.21
CSMD1-213ENST00000523488 GJA4P35212 333 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 GNALP38405 381 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 NFATC4Q14934 902 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 TMEM241Q24JQ0 296 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 TMPPEQ6ZT21 453 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.47□□□□□ -1.21
CSMD1-213ENST00000523488 THNSL2Q86YJ6 484 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF547Q8IVP9 402 aa7.47□□□□□ -1.21
CSMD1-213ENST00000523488 TMEM183AQ8IXX5 376 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms