RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 SGK3Q96BR1 496 aa15.63■□□□□ 0.09
SPIDR-220ENST00000522900 ADAT1Q9BUB4 502 aaKnown RBP15.63■□□□□ 0.09
SPIDR-220ENST00000522900 NTN4Q9HB63 628 aa15.63■□□□□ 0.09
SPIDR-220ENST00000522900 ZNF319Q9P2F9 582 aa15.63■□□□□ 0.09
SPIDR-220ENST00000522900 AUP1Q9Y679 476 aa15.63■□□□□ 0.09
SPIDR-220ENST00000522900 PRR23D1E9PI22 279 aaPredicted RBP15.62■□□□□ 0.09
SPIDR-220ENST00000522900 TBX1O43435 398 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 GMDSO60547 372 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 SELENOFO60613 162 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 FSTL3O95633 263 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 PRR23D2P0DMB1 279 aaPredicted RBP15.62■□□□□ 0.09
SPIDR-220ENST00000522900 RPS2P15880 293 aaKnown RBP15.62■□□□□ 0.09
SPIDR-220ENST00000522900 CD80P33681 288 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 HILS1P60008 231 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 GRB2P62993 217 aaKnown RBP15.62■□□□□ 0.09
SPIDR-220ENST00000522900 KLF17Q5JT82 389 aaPredicted RBP15.62■□□□□ 0.09
SPIDR-220ENST00000522900 USP43Q70EL4 1123 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 PRSS45Q7RTY3 260 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 C1orf87Q8N0U7 546 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 ERGIC1Q969X5 290 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 SPSB4Q96A44 273 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 SSBP3Q9BWW4 388 aaPredicted RBP15.62■□□□□ 0.09
SPIDR-220ENST00000522900 CADM1Q9BY67 442 aaKnown RBP15.62■□□□□ 0.09
SPIDR-220ENST00000522900 SLC22A4Q9H015 551 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 PPP1R3EQ9H7J1 279 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 ZNF556Q9HAH1 456 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 BRD7Q9NPI1 651 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 DNAJC27Q9NZQ0 273 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 MRPL15Q9P015 296 aaKnown RBP15.62■□□□□ 0.09
SPIDR-220ENST00000522900 DNAJB9Q9UBS3 223 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 MIOXQ9UGB7 285 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 LRCH1Q9Y2L9 728 aa15.62■□□□□ 0.09
SPIDR-220ENST00000522900 GSC2O15499 205 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 ANXA2P07355 339 aaKnown RBP15.61■□□□□ 0.09
SPIDR-220ENST00000522900 ANXA8P13928 327 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 IRF2P14316 349 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 HSD11B1P28845 292 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 OPRL1P41146 370 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 SLC15A1P46059 708 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 GNB2P62879 340 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 PAX8Q06710 450 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 FAM57BQ71RH2 274 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 SLC16A9Q7RTY1 509 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 CPOQ8IVL8 374 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 BBS1Q8NFJ9 593 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 OR11L1Q8NGX0 322 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 NEIL1Q96FI4 390 aaPredicted RBP15.61■□□□□ 0.09
SPIDR-220ENST00000522900 ESM1Q9NQ30 184 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 OR5V1Q9UGF6 321 aa15.61■□□□□ 0.09
SPIDR-220ENST00000522900 XRCC2O43543 280 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 TIPRLO75663 272 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 PTBP3O95758 552 aaKnown RBP15.6■□□□□ 0.09
SPIDR-220ENST00000522900 HMGN1P05114 100 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 GRPP07492 148 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 PAICSP22234 425 aaKnown RBP15.6■□□□□ 0.09
SPIDR-220ENST00000522900 ZNF121P58317 390 aaPredicted RBP15.6■□□□□ 0.09
SPIDR-220ENST00000522900 FAM3AP98173 230 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 KLHL12Q53G59 568 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 SFRP4Q6FHJ7 346 aaPredicted RBP15.6■□□□□ 0.09
SPIDR-220ENST00000522900 ZNF841Q6ZN19 808 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 ZNF826PQ6ZT77 177 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 SHFQ7M4L6 423 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 BPIFB2Q8N4F0 458 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 BOLLQ8N9W6 283 aaKnown RBP15.6■□□□□ 0.09
SPIDR-220ENST00000522900 THEM6Q8WUY1 208 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 ZFAND2BQ8WV99 257 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 MRI1Q9BV20 369 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 SUCNR1Q9BXA5 334 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 TOR3AQ9H497 397 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 FN3KRPQ9HA64 309 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 RNF7Q9UBF6 113 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 ZNF69Q9UC07 566 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 KLHDC2Q9Y2U9 406 aa15.6■□□□□ 0.09
SPIDR-220ENST00000522900 H2BFMP0C1H6 154 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 HOXB6P17509 224 aaKnown RBP15.59■□□□□ 0.09
SPIDR-220ENST00000522900 CPT2P23786 658 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 PITPNBP48739 271 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 HCCSP53701 268 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 BNIP1Q12981 228 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 ARMCX4Q5H9R4 360 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 BCL6BQ8N143 479 aaPredicted RBP15.59■□□□□ 0.09
SPIDR-220ENST00000522900 ZDHHC22Q8N966 263 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 OR8B3Q8NGG8 313 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 OTOSQ8NHW6 89 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 UTP4Q969X6 686 aaKnown RBP15.59■□□□□ 0.09
SPIDR-220ENST00000522900 DACT3Q96B18 629 aaPredicted RBP15.59■□□□□ 0.09
SPIDR-220ENST00000522900 REEP6Q96HR9 211 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 OR8B2Q96RD0 313 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 OPA3Q9H6K4 179 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 YY1AP1Q9H869 796 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 C1orf123Q9NWV4 160 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 NUP50Q9UKX7 468 aa15.59■□□□□ 0.09
SPIDR-220ENST00000522900 NOP16Q9Y3C1 178 aaKnown RBP15.59■□□□□ 0.09
SPIDR-220ENST00000522900 IGHV2-70DA0A0C4DH43 119 aa15.58■□□□□ 0.08
SPIDR-220ENST00000522900 hCG_38984A0A1B0GV85 526 aa15.58■□□□□ 0.08
SPIDR-220ENST00000522900 C3orf80F5H4A9 247 aa15.58■□□□□ 0.08
SPIDR-220ENST00000522900 TNFRSF13BO14836 293 aaPredicted RBP15.58■□□□□ 0.08
SPIDR-220ENST00000522900 FPR2P25090 351 aa15.58■□□□□ 0.08
SPIDR-220ENST00000522900 NAA10P41227 235 aaPredicted RBP15.58■□□□□ 0.08
SPIDR-220ENST00000522900 DAPP51397 102 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms