RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 NTN4Q9HB63 628 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 IGHV2-70DA0A0C4DH43 119 aa17.28■□□□□ 0.36
SDCBP-209ENST00000522243 DHRS12A0PJE2 317 aa17.28■□□□□ 0.36
SDCBP-209ENST00000522243 ACOT8O14734 319 aa17.28■□□□□ 0.36
SDCBP-209ENST00000522243 TEX30Q5JUR7 227 aa17.28■□□□□ 0.36
SDCBP-209ENST00000522243 NLRC3Q7RTR2 1065 aa17.28■□□□□ 0.36
SDCBP-209ENST00000522243 DPY19L4Q7Z388 723 aa17.28■□□□□ 0.36
SDCBP-209ENST00000522243 TMEM179BQ7Z7N9 219 aa17.28■□□□□ 0.36
SDCBP-209ENST00000522243 ERI1Q8IV48 349 aaKnown RBP17.28■□□□□ 0.36
SDCBP-209ENST00000522243 OR6N2Q8NGY6 317 aa17.28■□□□□ 0.36
SDCBP-209ENST00000522243 RAB40AQ8WXH6 277 aa17.28■□□□□ 0.36
SDCBP-209ENST00000522243 ZNF48Q96MX3 618 aaPredicted RBP17.28■□□□□ 0.36
SDCBP-209ENST00000522243 FN3KRPQ9HA64 309 aa17.28■□□□□ 0.36
SDCBP-209ENST00000522243 CMC2Q9NRP2 79 aa17.28■□□□□ 0.36
SDCBP-209ENST00000522243 SOX21Q9Y651 276 aaPredicted RBP17.28■□□□□ 0.36
SDCBP-209ENST00000522243 GMDSO60547 372 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 FSTL3O95633 263 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 ANXA2P07355 339 aaKnown RBP17.27■□□□□ 0.36
SDCBP-209ENST00000522243 GRPP07492 148 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 IGHV4-38-2P0DP08 117 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 CPT2P23786 658 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 GRK5P34947 590 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 CX3CR1P49238 355 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 LRRN1Q6UXK5 716 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 CD300LDQ6UXZ3 194 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 DCDC5Q6ZRR9 648 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 C3orf56Q8N813 242 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 CANT1Q8WVQ1 401 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 INTS14Q96SY0 518 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 MS4A7Q9GZW8 240 aaPredicted RBP17.27■□□□□ 0.36
SDCBP-209ENST00000522243 OR51V1Q9H2C8 321 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 RNF7Q9UBF6 113 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 CLN8Q9UBY8 286 aa17.27■□□□□ 0.36
SDCBP-209ENST00000522243 NOP16Q9Y3C1 178 aaKnown RBP17.27■□□□□ 0.36
SDCBP-209ENST00000522243 GNGT2O14610 69 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 XRCC2O43543 280 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 POU1F1P28069 291 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 HSD11B1P28845 292 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 GSTT1P30711 240 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 COMPP49747 757 aaPredicted RBP17.26■□□□□ 0.35
SDCBP-209ENST00000522243 BLVRAP53004 296 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 GRB2P62993 217 aaKnown RBP17.26■□□□□ 0.35
SDCBP-209ENST00000522243 WDR25Q64LD2 544 aaPredicted RBP17.26■□□□□ 0.35
SDCBP-209ENST00000522243 ZNF826PQ6ZT77 177 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 DOK3Q7L591 496 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 PARP8Q8N3A8 854 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 DACT3Q96B18 629 aaPredicted RBP17.26■□□□□ 0.35
SDCBP-209ENST00000522243 AMELYQ99218 206 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 NUDT16L1Q9BRJ7 211 aaKnown RBP17.26■□□□□ 0.35
SDCBP-209ENST00000522243 ABHD6Q9BV23 337 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 C1orf21Q9H246 121 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 MMADHCQ9H3L0 296 aaPredicted RBP17.26■□□□□ 0.35
SDCBP-209ENST00000522243 C1orf123Q9NWV4 160 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 DNAJC27Q9NZQ0 273 aa17.26■□□□□ 0.35
SDCBP-209ENST00000522243 MRPL15Q9P015 296 aaKnown RBP17.26■□□□□ 0.35
SDCBP-209ENST00000522243 PDP1Q9P0J1 537 aaPredicted RBP17.26■□□□□ 0.35
SDCBP-209ENST00000522243 TRAV40A0A0B4J280 105 aa17.25■□□□□ 0.35
SDCBP-209ENST00000522243 A6NLC8 198 aa17.25■□□□□ 0.35
SDCBP-209ENST00000522243 C3orf80F5H4A9 247 aa17.25■□□□□ 0.35
SDCBP-209ENST00000522243 SLC15A1P46059 708 aa17.25■□□□□ 0.35
SDCBP-209ENST00000522243 OR8B8Q15620 311 aa17.25■□□□□ 0.35
SDCBP-209ENST00000522243 TUSC1Q2TAM9 212 aa17.25■□□□□ 0.35
SDCBP-209ENST00000522243 ZNF841Q6ZN19 808 aa17.25■□□□□ 0.35
SDCBP-209ENST00000522243 HS3ST5Q8IZT8 346 aa17.25■□□□□ 0.35
SDCBP-209ENST00000522243 SGK3Q96BR1 496 aa17.25■□□□□ 0.35
SDCBP-209ENST00000522243 BRD7Q9NPI1 651 aa17.25■□□□□ 0.35
SDCBP-209ENST00000522243 CTSZQ9UBR2 303 aa17.25■□□□□ 0.35
SDCBP-209ENST00000522243 KIR2DS1A0A191URI9 304 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 DNAJC9-AS1A6NH13 148 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 LGALS8O00214 317 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 GLCEO94923 617 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 PTBP3O95758 552 aaKnown RBP17.24■□□□□ 0.35
SDCBP-209ENST00000522243 PSMB10P40306 273 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 FAM3AP98173 230 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 BAMBIQ13145 260 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 GK3PQ14409 553 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 GINS1Q14691 196 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 TIGD6Q17RP2 521 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 AWAT1Q58HT5 328 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 FAM57BQ71RH2 274 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 SLC16A9Q7RTY1 509 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 SPSB4Q96A44 273 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 UPRTQ96BW1 309 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 ZMYND19Q96E35 227 aaPredicted RBP17.24■□□□□ 0.35
SDCBP-209ENST00000522243 REEP6Q96HR9 211 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 C1orf147Q96MC9 270 aaPredicted RBP17.24■□□□□ 0.35
SDCBP-209ENST00000522243 TECTBQ96PL2 329 aa17.24■□□□□ 0.35
SDCBP-209ENST00000522243 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.23■□□□□ 0.35
SDCBP-209ENST00000522243 hCG_1807616A0A1W2PRN6 198 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 ARRDC5A6NEK1 342 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 AQP12BA6NM10 295 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 ANKRD30BLA7E2S9 258 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 C22orf46C9J442 243 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 PRKACGP22612 351 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 ZNF121P58317 390 aaPredicted RBP17.23■□□□□ 0.35
SDCBP-209ENST00000522243 POU4F2Q12837 409 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 GFOD2Q3B7J2 385 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 PLBD1Q6P4A8 553 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 AQP12AQ8IXF9 295 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 TIGD4Q8IY51 512 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms