RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	CDC42	P60953	191 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	CXCR4	P61073	352 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	SLC3A1	Q07837	685 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	AADACL4	Q5VUY2	407 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	PLEKHG7	Q6ZR37	379 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	PEG10	Q86TG7	708 aa	Known RBP	7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	BOLL	Q8N9W6	283 aa	Known RBP	7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	LINC01356	Q8N9X3	169 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	OR8B12	Q8NGG6	310 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	EME1	Q96AY2	570 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	C9orf16	Q9BUW7	83 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	YIPF3	Q9GZM5	350 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	OR10A2	Q9H208	303 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ADGRL4	Q9HBW9	690 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	USE1	Q9NZ43	259 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	NPTN	Q9Y639	398 aa		7.07	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ZFHX3	Q15911	3703 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	hCG_38984	A0A1B0GV85	526 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ERICH4	A6NGS2	130 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941		A6NLC8	198 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ANKRD30BL	A7E2S9	258 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	PRR32	B1ATL7	298 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ZNF670-ZNF695	F2Z2N8	137 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	GRP	P07492	148 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	IRF2	P14316	349 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ALOX5AP	P20292	161 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	RIDA	P52758	137 aa	Known RBP	7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	FAM3A	P98173	230 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	HOXA4	Q00056	320 aa	Predicted RBP	7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	RCN1	Q15293	331 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ZSCAN26	Q16670	478 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	LRRC36	Q1X8D7	754 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	CHRFAM7A	Q494W8	412 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	FAM201A	Q5SY85	155 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	KCTD18	Q6PI47	426 aa	Predicted RBP	7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ZNF322	Q6U7Q0	402 aa	Predicted RBP	7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ZBTB49	Q6ZSB9	765 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	PRSS45	Q7RTY3	260 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	C19orf18	Q8NEA5	215 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	OR10H4	Q8NGA5	316 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	OR52H1	Q8NGJ2	320 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	OR8J1	Q8NGP2	316 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	OR8S1	Q8NH09	359 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	UBE2F	Q969M7	185 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	SGK3	Q96BR1	496 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	RAB39B	Q96DA2	213 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	OR8B4	Q96RC9	309 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	MBOAT4	Q96T53	435 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	SLC29A1	Q99808	456 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	APOL4	Q9BPW4	351 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	REPIN1	Q9BWE0	567 aa	Known RBP	7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	PAPOLG	Q9BWT3	736 aa	Known RBP	7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	MRO	Q9BYG7	248 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	SHARPIN	Q9H0F6	387 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	OPA3	Q9H6K4	179 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ZNF665	Q9H7R5	613 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	SP140L	Q9H930	580 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	GCM1	Q9NP62	436 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ZNF319	Q9P2F9	582 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	AASS	Q9UDR5	926 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	PCDHB10	Q9UN67	800 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	GMPPB	Q9Y5P6	360 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	TMEM14A	Q9Y6G1	99 aa		7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	SON	P18583	2426 aa	Known RBP	7.06	□□□□□ -1.28
CTNNA1-231	ENST00000521941	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	7.05	□□□□□ -1.28	2e-14	■■■□□ 16.4
CTNNA1-231	ENST00000521941	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	TMEM269	A0A1B0GVZ9	245 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	hCG_1807616	A0A1W2PRN6	198 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	LOC110117498-PIK3R3	F6TDL0	507 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	TMEM178B	H3BS89	294 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941		H3BSH0	61 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	PHYH	O14832	338 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	FAM20B	O75063	409 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	CRLF1	O75462	422 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	RPP14	O95059	124 aa	Known RBP	7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	IGHV2-70	P01814	119 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	IGHV2-5	P01817	119 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	HTR1F	P30939	366 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	CD80	P33681	288 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	GNAL	P38405	381 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	GSK3A	P49840	483 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	LMO4	P61968	165 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	BTG1	P62324	171 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	EFNB1	P98172	346 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	MFGE8	Q08431	387 aa	Predicted RBP	7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	MAB21L1	Q13394	359 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ZMYND11	Q15326	602 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	MPPED2	Q15777	294 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ODF4	Q2M2E3	257 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	CR1L	Q2VPA4	569 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ZNF829	Q3KNS6	432 aa	Predicted RBP	7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	SSX6	Q7RTT6	188 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	GLCCI1	Q86VQ1	547 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ZNF679	Q8IYX0	411 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	GALNT4	Q8N4A0	578 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	YIPF7	Q8N8F6	280 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	OR11L1	Q8NGX0	322 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	OR51F2	Q8NH61	342 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	ASB17	Q8WXJ9	295 aa		7.05	□□□□□ -1.28
CTNNA1-231	ENST00000521941	HPS1	Q92902	700 aa		7.05	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms