RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 HOXA4Q00056 320 aaPredicted RBP13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 KCNJ8Q15842 424 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZNF181Q2M3W8 571 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 DCDC5Q6ZRR9 648 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 OR56B2PQ8NGI1 322 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 RAB40AQ8WXH6 277 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 ERGIC1Q969X5 290 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 CLPTM1LQ96KA5 538 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 OR51V1Q9H2C8 321 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 TNFRSF19Q9NS68 423 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 ADAM20O43506 726 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 XRCC2O43543 280 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 GMDSO60547 372 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 RAP2AP10114 183 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 MTNR1AP48039 350 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 BLVRAP53004 296 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 GRB2P62993 217 aaKnown RBP13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 MZT1Q08AG7 82 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 KLF17Q5JT82 389 aaPredicted RBP13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZNF770Q6IQ21 691 aaPredicted RBP13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 FAM57BQ71RH2 274 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 CELF2-AS1Q8N7Q2 184 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 GIPC3Q8TF64 312 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZDHHC16Q969W1 377 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZMYND19Q96E35 227 aaPredicted RBP13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 INTS14Q96SY0 518 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 NIPSNAP1Q9BPW8 284 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 PCGF1Q9BSM1 259 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 THTPAQ9BU02 230 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 OPA3Q9H6K4 179 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 C14orf119Q9NWQ9 140 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 KIF17Q9P2E2 1029 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 ERVK-18Q9QC07 812 aa13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 PRPF19Q9UMS4 504 aaKnown RBP13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 POLR3KQ9Y2Y1 108 aaPredicted RBP13.49□□□□□ -0.25
IGHV3-42-201ENST00000520410 DHRS12A0PJE2 317 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 C5orf63A6NC05 138 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 H2BFMP0C1H6 154 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 GSTT1P30711 240 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 GNALP38405 381 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 GATA4P43694 442 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 SLC25A1P53007 311 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 FGF12P61328 243 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 RPS7P62081 194 aaKnown RBP13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 MS4A2Q01362 244 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 KLHL12Q53G59 568 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 AWAT1Q58HT5 328 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 DPY19L4Q7Z388 723 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 SLC25A28Q96A46 364 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 ASB9Q96DX5 294 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 REEP6Q96HR9 211 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 PGAM5Q96HS1 289 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 DGCR6LQ9BY27 220 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 SP140LQ9H930 580 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 MARCH7Q9H992 704 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZNF556Q9HAH1 456 aa13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 MRPL15Q9P015 296 aaKnown RBP13.48□□□□□ -0.25
IGHV3-42-201ENST00000520410 LGALS8O00214 317 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 PHYHO14832 338 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 ENSAO43768 121 aaKnown RBP13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 FAM107AO95990 144 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 GYPAP02724 150 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 ANOS1P23352 680 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 CPT2P23786 658 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 PRTN3P24158 256 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 GRK5P34947 590 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 PAX8Q06710 450 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 GPR157Q5UAW9 335 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 WDR25Q64LD2 544 aaPredicted RBP13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 BRD3OSQ6XYD6 125 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZNF826PQ6ZT77 177 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 DOK3Q7L591 496 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 SPATA24Q86W54 205 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 SPERTQ8NA61 448 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 Q8TCH9 128 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 DDOQ99489 341 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 FEVQ99581 238 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 CHID1Q9BWS9 393 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZMAT3Q9HA38 289 aaKnown RBP13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 CMC2Q9NRP2 79 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 PDP1Q9P0J1 537 aaPredicted RBP13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 PCDHGB1Q9Y5G3 927 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 ARHGAP32A7KAX9 2087 aa13.47□□□□□ -0.25
IGHV3-42-201ENST00000520410 IGHV3OR15-7A0A075B7D8 119 aa13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 TRAV38-1A0A0B4J264 116 aa13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 MDFIC2A0A1B0GVS7 189 aa13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 OOEPA6NGQ2 149 aa13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 PRR23D1E9PI22 279 aaPredicted RBP13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 APOC1P02654 83 aa13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 PRR23D2P0DMB1 279 aaPredicted RBP13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 GMFBP60983 142 aa13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 POU4F2Q12837 409 aa13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 FOXL1Q12952 345 aa13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZNF362Q5T0B9 420 aaPredicted RBP13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 SLC16A9Q7RTY1 509 aa13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 THEM6Q8WUY1 208 aa13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZNF48Q96MX3 618 aaPredicted RBP13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 PAPOLGQ9BWT3 736 aaKnown RBP13.46□□□□□ -0.25
IGHV3-42-201ENST00000520410 OR10A2Q9H208 303 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms