RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TNFRSF1AP19438 455 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 ACTG1P63261 375 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 HIST1H3AP68431 136 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 ZNF154Q13106 437 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 ZMYND11Q15326 602 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 RSPO1Q2MKA7 263 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 KRTAP27-1Q3LI81 207 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 FGD3Q5JSP0 725 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 HIST2H3PS2Q5TEC6 136 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 GLYATQ6IB77 296 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 OR2T2Q6IF00 324 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 C1orf94Q6P1W5 598 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 FBXW12Q6X9E4 464 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 HIST2H3AQ71DI3 136 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 BPIFB2Q8N4F0 458 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 LINC00482Q8N8I6 264 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 POP5Q969H6 163 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 TSSK2Q96PF2 358 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 ADI1Q9BV57 179 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 RERGLQ9H628 205 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 DCAF13Q9NV06 445 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 IL20RAQ9UHF4 553 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 ATPIF1Q9UII2 106 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 B9D1Q9UPM9 204 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 PPP1R3CQ9UQK1 317 aa7.78□□□□□ -1.16
CTNNA1-221ENST00000520339 IGLV1-36A0A0B4J1U3 117 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 DHRS12A0PJE2 317 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 A8MXK9 166 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 H3BNX3 289 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 DCTN6O00399 190 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 SOCS2O14508 198 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 ARPC3O15145 178 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 MTRF1O75570 445 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 DIRAS1O95057 198 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 GPANK1O95872 356 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 WNT2P09544 360 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 EGR1P18146 543 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 CPT2P23786 658 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 RGS6P49758 472 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 SEC61A1P61619 476 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 BTG1P62324 171 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 UBA52P62987 128 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 PAX8Q06710 450 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 HLXQ14774 488 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 RFX4Q33E94 735 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 KLF17Q5JT82 389 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 SLC27A4Q6P1M0 643 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 SMARCD3Q6STE5 483 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 COLCA1Q6ZS62 124 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 DOK3Q7L591 496 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 OR5AS1Q8N127 324 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 OR6V1Q8N148 313 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 PQLC1Q8N2U9 271 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 KLHL36Q8N4N3 616 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 FAM86B1Q8N7N1 296 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 C3orf56Q8N813 242 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 ATG16L2Q8NAA4 619 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 ZBTB8BQ8NAP8 495 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 OR8G5Q8NG78 346 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 OR5L1Q8NGL2 311 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 OR13G1Q8NGZ3 307 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 OR52J3Q8NH60 311 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 GIMAP1Q8WWP7 306 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 C22orf15Q8WYQ4 148 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 APOBEC3DQ96AK3 386 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 DUS3LQ96G46 650 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 NSMCE2Q96MF7 247 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 OR2V2Q96R30 315 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 COQ7Q99807 217 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 VCX3BQ9H321 246 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 GORASP2Q9H8Y8 452 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 NTN4Q9HB63 628 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 TMEM165Q9HC07 324 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 GCM1Q9NP62 436 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 PTTG3PQ9NZH4 202 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 NUP50Q9UKX7 468 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 AURKCQ9UQB9 309 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 INSIG2Q9Y5U4 225 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 LHFPL6Q9Y693 200 aa7.77□□□□□ -1.17
CTNNA1-221ENST00000520339 WNK2Q9Y3S1 2297 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 A0A1B0GWJ7 208 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 CEACAM18A8MTB9 384 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 IFNL4K9M1U5 179 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 PPP1R3DO95685 299 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 KNG1P01042 644 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 SEMG1P04279 462 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 FCGR1AP12314 374 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 CRABP1P29762 137 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 VHLP40337 213 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 MDH2P40926 338 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 PMELP40967 661 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 SMIM11AP58511 58 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 PAX2Q02962 417 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 COX10Q12887 443 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 MEP1BQ16820 701 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 AWAT1Q58HT5 328 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 CORO6Q6QEF8 472 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 BCL6BQ8N143 479 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 SIGLECL1Q8N7X8 197 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 GJC3Q8NFK1 279 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms