RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 DENND6BQ8NEG7 585 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 TRPV1Q8NER1 839 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR56A4Q8NGH8 313 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR1S1Q8NH92 325 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF675Q8TD23 568 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 HAVCR2Q8TDQ0 301 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF431Q8TF32 576 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 GLYATL2Q8WU03 294 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 TMEM37Q8WXS4 190 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ELMO1Q92556 727 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 PSMG2Q969U7 264 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ARL5BQ96KC2 179 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 C7orf34Q96L11 122 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CASD1Q96PB1 797 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC38A2Q96QD8 506 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR2M2Q96R28 347 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR2A7Q96R45 310 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 KCNA7Q96RP8 456 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF382Q96SR6 550 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 FAM173AQ9BQD7 235 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 UTP23Q9BRU9 249 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF436Q9C0F3 470 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 POLR1EQ9GZS1 481 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 SAV1Q9H4B6 383 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ALG9Q9H6U8 611 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CWH43Q9H720 699 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ACTR8Q9H981 624 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 FOLH1BQ9HBA9 442 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 RDH14Q9HBH5 336 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZDHHC4Q9NPG8 344 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 BIN3Q9NQY0 253 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 FAM120CQ9NX05 1096 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 NDUFB11Q9NX14 153 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 IMPAD1Q9NX62 359 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 SCN3BQ9NY72 215 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 RDH8Q9NYR8 311 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 TAS2R13Q9NYV9 303 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC25A37Q9NYZ2 338 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 TREM2Q9NZC2 230 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CNOT2Q9NZN8 540 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CD274Q9NZQ7 290 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 DHRS4-AS1Q9P1J3 65 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 MYEF2Q9P2K5 600 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 UXTQ9UBK9 157 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 SPASTQ9UBP0 616 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 COPS7AQ9UBW8 275 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 PHF11Q9UIL8 331 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF225Q9UK10 706 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 DHRS7Q9Y394 339 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 AP1M2Q9Y6Q5 423 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 MCM3APO60318 1980 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 KIF26AQ9ULI4 1882 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 PIKFYVEQ9Y2I7 2098 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 DSPPQ9NZW4 1301 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 PTPRDP23468 1912 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 ANAPC1Q9H1A4 1944 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 TRAV9-2A0A087WT02 112 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 TRAV19A0A0A6YYK7 116 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 COLCA2A8K830 154 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 C9JVG2 144 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 INMT-MINDY4F8WBC2 141 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 WRBO00258 174 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 SULT1C2O00338 296 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 PDCD5O14737 125 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 LYRM1O43325 122 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 ORC5O43913 435 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 RAD1O60671 282 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 HPGDSO60760 199 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF253O75346 499 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 ECI2O75521 394 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 RHBDL1O75783 438 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 SNAPC5O75971 98 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 CCNB2O95067 398 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 GADD45GO95257 159 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 PRAMEF12O95522 483 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 CD160O95971 181 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 DHFRP00374 187 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 IGKV3-15P01624 115 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 THY1P04216 161 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 GP1BAP07359 652 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 STSP08842 583 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 LINC00032P0C843 101 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 RPS2P15880 293 aaKnown RBP2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 CBR1P16152 277 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 UGT2B7P16662 529 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 CXCL2P19875 107 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 IGFBP5P24593 272 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR1E1P30953 314 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 MAT2AP31153 395 aaKnown RBP2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 CD52P31358 61 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 FGF9P31371 208 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 PMELP40967 661 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 RPL35P42766 123 aaKnown RBP2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 STK19P49842 368 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 GDI2P50395 445 aaKnown RBP2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 RORCP51449 518 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 CCL11P51671 97 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 PLK1P53350 603 aa2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 PSMD4P55036 377 aaKnown RBP2.49□□□□□ -2.01
HMGB1P41-201ENST00000520234 FOXA1P55317 472 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms