RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 FMO3P31513 532 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 PMELP40967 661 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 SLC25A1P53007 311 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 PRSS12P56730 875 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 SLC3A1Q07837 685 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 GK3PQ14409 553 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 LINC01590Q5TEZ4 76 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 SLC27A4Q6P1M0 643 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 FAHD2BQ6P2I3 314 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-215ENST00000519474 GLCCI1Q86VQ1 547 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 PHC2Q8IXK0 858 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 HS3ST5Q8IZT8 346 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 ZNF283Q8N7M2 679 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 ATG16L2Q8NAA4 619 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 OR10G2Q8NGC3 310 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 OR9Q1Q8NGQ5 310 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 OR13G1Q8NGZ3 307 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 SLCO4A1Q96BD0 722 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 FAHD2AQ96GK7 314 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 TIMD4Q96H15 378 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 ZNF582Q96NG8 517 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-215ENST00000519474 OR2V2Q96R30 315 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 SIGLEC11Q96RL6 698 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 SLC30A2Q9BRI3 323 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 HCAR1Q9BXC0 346 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 CADM1Q9BY67 442 aaKnown RBP7.88□□□□□ -1.15
HDAC3-215ENST00000519474 MED20Q9H944 212 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 NTN4Q9HB63 628 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 NEK6Q9HC98 313 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 G6PC2Q9NQR9 355 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 TMEM106BQ9NUM4 274 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 TBC1D23Q9NUY8 699 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 POMPQ9Y244 141 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 TRAV20A0A0B4J274 112 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 DHRS12A0PJE2 317 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 TMEM178BH3BS89 294 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 GNGT2O14610 69 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 SURF4O15260 269 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 MLNRO43193 412 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 IGHV2-70P01814 119 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 TNFRSF1AP19438 455 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 HNF1AP20823 631 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 TNFSF4P23510 183 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 ZFP36P26651 326 aaKnown RBP7.87□□□□□ -1.15
HDAC3-215ENST00000519474 OTX1P32242 354 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-215ENST00000519474 TPTEP56180 551 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 CDK5Q00535 292 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 GK2Q14410 553 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-215ENST00000519474 GINS1Q14691 196 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 GFOD2Q3B7J2 385 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 KRTAP24-1Q3LI83 254 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 ZMAT1Q5H9K5 638 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 DCXRQ7Z4W1 244 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 PEG10Q86TG7 708 aaKnown RBP7.87□□□□□ -1.15
HDAC3-215ENST00000519474 IQCF1Q8N6M8 205 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 PROKR2Q8NFJ6 384 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 OR2T33Q8NG76 320 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 OR51F2Q8NH61 342 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 TEX47Q8TBZ9 253 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 TMEM158Q8WZ71 300 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 MEGF10Q96KG7 1140 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 KCNJ15Q99712 375 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 ATF6BQ99941 703 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 REPIN1Q9BWE0 567 aaKnown RBP7.87□□□□□ -1.15
HDAC3-215ENST00000519474 PATZ1Q9HBE1 687 aaKnown RBP7.87□□□□□ -1.15
HDAC3-215ENST00000519474 GCM1Q9NP62 436 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 CMC2Q9NRP2 79 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 CENPMQ9NSP4 180 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 DDX28Q9NUL7 540 aaKnown RBP7.87□□□□□ -1.15
HDAC3-215ENST00000519474 TMEM100Q9NV29 134 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 PDP1Q9P0J1 537 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-215ENST00000519474 METRNQ9UJH8 293 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 PPP1R3CQ9UQK1 317 aa7.87□□□□□ -1.15
HDAC3-215ENST00000519474 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.87□□□□□ -1.151e-6■■■■□ 22.8
HDAC3-215ENST00000519474 ARRDC5A6NEK1 342 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 FAM183AA6NL82 134 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 F5H5P2 479 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 M0R135 149 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 GPR37O15354 613 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 HLA-DPB1P04440 258 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 WNT2P09544 360 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 OSMP13725 252 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 SELEP16581 610 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 GRK5P34947 590 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 SRP14P37108 136 aaKnown RBP7.86□□□□□ -1.15
HDAC3-215ENST00000519474 ENTPD1P49961 510 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 PRKXP51817 358 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 ZNF92Q03936 586 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 MAB21L1Q13394 359 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 COTL1Q14019 142 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 FLOT2Q14254 428 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 SNAI3Q3KNW1 292 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 DNAL1Q4LDG9 190 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 CLVS2Q5SYC1 327 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 BHLHE23Q8NDY6 225 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 ZNF680Q8NEM1 530 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 ZNF420Q8TAQ5 688 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-215ENST00000519474 ST7LQ8TDW4 575 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 RAB39BQ96DA2 213 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 SLAMF6Q96DU3 332 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms