RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 RAD23AP54725 363 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 DVL1P1P54792 670 aaPredicted RBP11.19□□□□□ -0.62
VEGFA-219ENST00000518824 GFOD2Q3B7J2 385 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 C1orf229Q6ZS94 237 aaPredicted RBP11.19□□□□□ -0.62
VEGFA-219ENST00000518824 SLC16A9Q7RTY1 509 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 TMEM163Q8TC26 289 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 SPRYD4Q8WW59 207 aaPredicted RBP11.19□□□□□ -0.62
VEGFA-219ENST00000518824 PPP1R14AQ96A00 147 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 SPSB4Q96A44 273 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 TIMD4Q96H15 378 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 REEP6Q96HR9 211 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 LYZL4Q96KX0 146 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 GAL3ST1Q99999 423 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 GABARAPL3Q9BY60 117 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 SHARPINQ9H0F6 387 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 UFSP2Q9NUQ7 469 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 HIF1ANQ9NWT6 349 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 CDC42EP3Q9UKI2 254 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 LRP12Q9Y561 859 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 hCG_38984A0A1B0GV85 526 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 EI24O14681 340 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 FAM20BO75063 409 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 APOL3O95236 402 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 FAM157CP0CG43 387 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 ZFP36P26651 326 aaKnown RBP11.18□□□□□ -0.62
VEGFA-219ENST00000518824 ZIK1Q3SY52 487 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-219ENST00000518824 MEPCEQ7L2J0 689 aaKnown RBP11.18□□□□□ -0.62
VEGFA-219ENST00000518824 WDR86Q86TI4 376 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 LRRC28Q86X40 367 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-219ENST00000518824 OR8B12Q8NGG6 310 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 TMEM186Q96B77 213 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 PGAM5Q96HS1 289 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 YIPF3Q9GZM5 350 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 TOR3AQ9H497 397 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 ADGRL4Q9HBW9 690 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 G6PC2Q9NQR9 355 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 AASSQ9UDR5 926 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 LAMP5Q9UJQ1 280 aa11.18□□□□□ -0.62
VEGFA-219ENST00000518824 E9PQ18 207 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 XRCC2O43543 280 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 ALPLP05186 524 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 ACKR3P25106 362 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 CD200P41217 278 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 SRP9P49458 86 aaKnown RBP11.17□□□□□ -0.62
VEGFA-219ENST00000518824 GSK3AP49840 483 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 BTG1P62324 171 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 LCN2P80188 198 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 SLC3A1Q07837 685 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 MFGE8Q08431 387 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-219ENST00000518824 OR8G1Q15617 311 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 TIGD6Q17RP2 521 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 PLEKHG7Q6ZR37 379 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 ZNF826PQ6ZT77 177 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 SSX6Q7RTT6 188 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 GLCCI1Q86VQ1 547 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 ZNF454Q8N9F8 522 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 SLC29A1Q99808 456 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 ADAT1Q9BUB4 502 aaKnown RBP11.17□□□□□ -0.62
VEGFA-219ENST00000518824 TEX12Q9BXU0 123 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 FGF23Q9GZV9 251 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-219ENST00000518824 TMEM165Q9HC07 324 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 S100A14Q9HCY8 104 aa11.17□□□□□ -0.62
VEGFA-219ENST00000518824 FBN1P35555 2871 aaKnown RBP11.16□□□□□ -0.62
VEGFA-219ENST00000518824 PNPP00491 289 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 GATA4P43694 442 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 PSMA6P60900 246 aaKnown RBP11.16□□□□□ -0.62
VEGFA-219ENST00000518824 DMRTC1Q5HYR2 192 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 NXNL2Q5VZ03 156 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 RHOUQ7L0Q8 258 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 KRT77Q7Z794 578 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.16□□□□□ -0.62
VEGFA-219ENST00000518824 SLC35F2Q8IXU6 374 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 CBR4Q8N4T8 237 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 OR51F2Q8NH61 342 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 EME1Q96AY2 570 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 RAB39BQ96DA2 213 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 OR8B4Q96RC9 309 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 MBOAT4Q96T53 435 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 CNN2Q99439 309 aaKnown RBP11.16□□□□□ -0.62
VEGFA-219ENST00000518824 APOL4Q9BPW4 351 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 RBM4BQ9BQ04 359 aaKnown RBP11.16□□□□□ -0.62
VEGFA-219ENST00000518824 METTL17Q9H7H0 456 aaPredicted RBP11.16□□□□□ -0.62
VEGFA-219ENST00000518824 PATZ1Q9HBE1 687 aaKnown RBP11.16□□□□□ -0.62
VEGFA-219ENST00000518824 MMP26Q9NRE1 261 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 FAM206AQ9NX38 181 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 MRPL15Q9P015 296 aaKnown RBP11.16□□□□□ -0.62
VEGFA-219ENST00000518824 RHBDD3Q9Y3P4 386 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 WNK2Q9Y3S1 2297 aa11.16□□□□□ -0.62
VEGFA-219ENST00000518824 CEACAM18A8MTB9 384 aa11.15□□□□□ -0.62
VEGFA-219ENST00000518824 F5H0A9 414 aaPredicted RBP11.15□□□□□ -0.62
VEGFA-219ENST00000518824 TRAPPC2LH3BP13 241 aa11.15□□□□□ -0.62
VEGFA-219ENST00000518824 PHF1O43189 567 aaPredicted RBP11.15□□□□□ -0.62
VEGFA-219ENST00000518824 SRSF10O75494 262 aaKnown RBP11.15□□□□□ -0.62
VEGFA-219ENST00000518824 PTBP3O95758 552 aaKnown RBP11.15□□□□□ -0.62
VEGFA-219ENST00000518824 GRPP07492 148 aa11.15□□□□□ -0.62
VEGFA-219ENST00000518824 SRD5A1P18405 259 aa11.15□□□□□ -0.62
VEGFA-219ENST00000518824 CXCR4P61073 352 aa11.15□□□□□ -0.62
VEGFA-219ENST00000518824 ELF3P78545 371 aaPredicted RBP11.15□□□□□ -0.62
VEGFA-219ENST00000518824 TMEM155Q4W5P6 130 aa11.15□□□□□ -0.62
VEGFA-219ENST00000518824 LCN1P1Q5VSP4 162 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms