RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 ENKURQ8TC29 256 aa0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 OR51E1Q8TCB6 317 aa0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 RXFP4Q8TDU9 374 aa0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 SYAP1Q96A49 352 aaPredicted RBP0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 SLC41A3Q96GZ6 507 aa0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 C20orf166-AS1Q96NR2 134 aa0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 OR4K3Q96R72 315 aa0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 KCNS3Q9BQ31 491 aa0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 SLIRPQ9GZT3 109 aaKnown RBP0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 METTL7AQ9H8H3 244 aa0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 FBXO8Q9NRD0 319 aa0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 MTCH1Q9NZJ7 389 aa0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 CLEC4AQ9UMR7 237 aa0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 USP47Q96K76 1375 aa0.67□□□□□ -2.3
RNU6-1088P-201ENST00000516850 RAD51CO43502 376 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 KCNK2O95069 426 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 IGHMP01871 453 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 CT45A6P0DMU7 189 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 CT45A5P0DMU8 189 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 CT45A7P0DMV0 189 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 PRPS1L1P21108 318 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 TPMTP51580 245 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 AIF1P55008 147 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 PLP1P60201 277 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 FMODQ06828 376 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 PSMD5Q16401 504 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 CT45A1Q5HYN5 189 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 LDLRAD2Q5SZI1 272 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 C9orf135Q5VTT2 229 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 KCTD16Q68DU8 428 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 TMPRSS11AQ6ZMR5 421 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 Q6ZSR6 202 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 MBOAT2Q6ZWT7 520 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 NIPA1Q7RTP0 329 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 CT45A3Q8NHU0 189 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 ZNF420Q8TAQ5 688 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 VCX2Q9H322 139 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 VSIRQ9H7M9 311 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 RETNQ9HD89 108 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 OR2S2Q9NQN1 319 aa0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 KMT2BQ9UMN6 2715 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1088P-201ENST00000516850 IGKV1-27A0A075B6S5 117 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 IGHV3OR16-9A0A0B4J2B5 98 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 IGKV2-29A2NJV5 120 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 H7C1H1 209 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RAB29O14966 203 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 MTX2O75431 263 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CDS2O95674 445 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SLC35G6P0C7Q6 338 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 MX1P20591 662 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 MYL9P24844 172 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CD86P42081 329 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 FOXA1P55317 472 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 OR12D2P58182 307 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SP4Q02446 784 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 BST2Q10589 180 aaKnown RBP0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 KRTAP25-1Q3LHN0 102 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CTSL3PQ5NE16 218 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 C12orf54Q6X4T0 127 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CERS6Q6ZMG9 384 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RUFY3Q7L099 469 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 BBS7Q8IWZ6 715 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 FAM9BQ8IZU0 186 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 EIF4E3Q8N5X7 224 aaKnown RBP0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SLC25A29Q8N8R3 303 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 BHLHE23Q8NDY6 225 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 OR4M2Q8NGB6 313 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 DCAKDQ8WVC6 231 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SLC29A1Q99808 456 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ERP44Q9BS26 406 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 HIGD2AQ9BW72 106 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ROPN1BQ9BZX4 212 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 PIGUQ9H490 435 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RAB22AQ9UL26 194 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ISY1Q9ULR0 285 aaKnown RBP0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 DDX19BQ9UMR2 479 aa0.65□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ICE1Q9Y2F5 2266 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CR1P17927 2039 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TRGV4A0A0C4DH28 118 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 M0R1X1 148 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TNNI1P19237 187 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 GZMHP20718 246 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 EIF3EP60228 445 aaKnown RBP0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SEMG2Q02383 582 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CDC37Q16543 378 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 LGALSLQ3ZCW2 172 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 LRRC23Q53EV4 343 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 PPM1LQ5SGD2 360 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TPTE2P1Q5T6R2 138 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 FAM104BQ5XKR9 115 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ZNF322Q6U7Q0 402 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CMC1Q7Z7K0 106 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 DRAM1Q8N682 238 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 OR5P3Q8WZ94 311 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CDS1Q92903 461 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RBPMSQ93062 196 aaKnown RBP0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ECHDC3Q96DC8 303 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 NRBF2Q96F24 287 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 KCNS1Q96KK3 526 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 BTN2A3PQ96KV6 586 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms