RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 FAM218AQ96MZ4 157 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF75AQ96N20 296 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF681Q96N22 645 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 MBOAT7Q96N66 472 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRAP1Q96NZ9 151 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SCGB3A2Q96PL1 93 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 RBP7Q96R05 134 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5B12Q96R08 314 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 TBX15Q96SF7 602 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 HIST1H4GQ99525 98 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 TEAD3Q99594 435 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SDHCQ99643 169 aaPredicted RBP0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 PITX2Q99697 317 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 MCHR1Q99705 422 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRRT1Q99946 306 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 RARRES2Q99969 163 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 NIPSNAP1Q9BPW8 284 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 DHRS9Q9BPW9 319 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 PDCD1LG2Q9BQ51 273 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SULT4A1Q9BR01 284 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 MRPL45Q9BRJ2 306 aaKnown RBP0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 RIOK2Q9BVS4 552 aaKnown RBP0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 OSBPL11Q9BXB4 747 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 HCAR1Q9BXC0 346 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 UGT2B28Q9BY64 529 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 HES7Q9BYE0 225 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SRXN1Q9BYN0 137 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 CHIAQ9BZP6 476 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 BCL2L14Q9BZR8 327 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 NMUR2Q9GZQ4 415 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 CHRNA10Q9GZZ6 450 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC22A4Q9H015 551 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ARL6Q9H0F7 186 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 CSTL1Q9H114 145 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 METTL9Q9H1A3 318 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 TLNRD1Q9H1K6 362 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 IL25Q9H293 177 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 NEUROG2Q9H2A3 272 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 LHX5Q9H2C1 402 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR51B5Q9H339 312 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR51J1Q9H342 316 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 MFSD1Q9H3U5 465 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 TRABDQ9H4I3 376 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF442Q9H7R0 627 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 MOB1AQ9H8S9 216 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 CAB39LQ9H9S4 337 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 WDR41Q9HAD4 459 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 C12orf10Q9HB07 376 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 RHOFQ9HBH0 211 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 RDH14Q9HBH5 336 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 BEX1Q9HBH7 125 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLGRKTQ9HBL7 147 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ADGRL4Q9HBW9 690 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 AMBNQ9NP70 447 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ABCB9Q9NP78 766 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SIX2Q9NPC8 291 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 EXOSC4Q9NPD3 245 aaKnown RBP0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ACP6Q9NPH0 428 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ISYNA1Q9NPH2 558 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 IL1RAPQ9NPH3 570 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ACOT13Q9NPJ3 140 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 B3GAT2Q9NPZ5 323 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 TIGARQ9NQ88 270 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 DIABLOQ9NR28 239 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC2A9Q9NRM0 540 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 AGPAT4Q9NRZ5 378 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ABCC13Q9NSE7 274 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 C19orf12Q9NSK7 152 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 DEPPQ9NTK1 212 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZFP57Q9NU63 452 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLCXD1Q9NUJ7 323 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 NLE1Q9NVX2 485 aaPredicted RBP0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 OCIAD1Q9NX40 245 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 IMPAD1Q9NX62 359 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 TAS2R16Q9NYV7 291 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC25A37Q9NYZ2 338 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 KCNIP1Q9NZI2 227 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 COMMD9Q9P000 198 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM9Q9P0T7 183 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ARMCX1Q9P291 453 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM181Q9P2C4 612 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SPRR3Q9UBC9 169 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 Q9UF83 564 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC2A6Q9UGQ3 507 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 MLXQ9UH92 298 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SHPKQ9UHJ6 478 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 OPN4Q9UHM6 478 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 RSPH14Q9UHP6 348 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 MUTYHQ9UIF7 546 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF107Q9UII5 783 aaPredicted RBP0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 GNPTGQ9UJJ9 305 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF391Q9UJN7 358 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 LSM7Q9UK45 103 aaKnown RBP0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 CES1P1Q9UKY3 287 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAB22AQ9UL26 194 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 MMP17Q9ULZ9 603 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SPATA2Q9UM82 520 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 ING4Q9UNL4 249 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC7A11Q9UPY5 501 aa0.47□□□□□ -2.33
RNU4-54P-201ENST00000516428 PPP1R3CQ9UQK1 317 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms