RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 MMP26Q9NRE1 261 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 KRT84Q9NSB2 600 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 CCDC182A6NF36 153 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 PRR32B1ATL7 298 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 FAM20BO75063 409 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 LYNP07948 512 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 ANPEPP15144 967 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 SLC2A5P22732 501 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 SLC15A1P46059 708 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 BLVRAP53004 296 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 GRB2P62993 217 aaKnown RBP9.65□□□□□ -0.86
VCAN-212ENST00000515397 POU4F2Q12837 409 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 KPNB1Q14974 876 aaKnown RBP9.65□□□□□ -0.86
VCAN-212ENST00000515397 TIGD6Q17RP2 521 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 SFRP4Q6FHJ7 346 aaPredicted RBP9.65□□□□□ -0.86
VCAN-212ENST00000515397 LYPD2Q6UXB3 125 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 ZNF826PQ6ZT77 177 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 ASRGL1Q7L266 308 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 SLC16A9Q7RTY1 509 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.65□□□□□ -0.86
VCAN-212ENST00000515397 ZDHHC13Q8IUH4 622 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 TCEANCQ8N8B7 351 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 OTOSQ8NHW6 89 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 PPP1R14AQ96A00 147 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 REEP6Q96HR9 211 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 PGAM5Q96HS1 289 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 IL4I1Q96RQ9 567 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 TEAD3Q99594 435 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 TMPRSS13Q9BYE2 586 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 MMADHCQ9H3L0 296 aaPredicted RBP9.65□□□□□ -0.86
VCAN-212ENST00000515397 OCEL1Q9H607 264 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 COPS3Q9UNS2 423 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 DNHD1Q96M86 4753 aa9.65□□□□□ -0.86
VCAN-212ENST00000515397 TRAV20A0A0B4J274 112 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 CEACAM18A8MTB9 384 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 TRAPPC2LH3BP13 241 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 FAM3AP98173 230 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 KRTAP24-1Q3LI83 254 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 DMRTC1Q5HYR2 192 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 DCAF12L2Q5VW00 463 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 KDM4DQ6B0I6 523 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 CCDC121Q6ZUS5 278 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 PRSS45Q7RTY3 260 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 PHC2Q8IXK0 858 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 KLHL36Q8N4N3 616 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 RFLNBQ8N5W9 214 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 C22orf15Q8WYQ4 148 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 CIB1Q99828 191 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 PKP2Q99959 881 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 TMEM246Q9BRR3 403 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 ADAT1Q9BUB4 502 aaKnown RBP9.64□□□□□ -0.87
VCAN-212ENST00000515397 C7orf69Q9H7B7 122 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 PATZ1Q9HBE1 687 aaKnown RBP9.64□□□□□ -0.87
VCAN-212ENST00000515397 LAMP5Q9UJQ1 280 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 OAZ3Q9UMX2 235 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 RHBDD3Q9Y3P4 386 aa9.64□□□□□ -0.87
VCAN-212ENST00000515397 A0A1B0GWJ7 208 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 ZAR1LA6NP61 321 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 PRODHO43272 600 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 APOL3O95236 402 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 PNPP00491 289 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 WNT2P09544 360 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 ALOX5APP20292 161 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 CD80P33681 288 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 MDH2P40926 338 aaKnown RBP9.63□□□□□ -0.87
VCAN-212ENST00000515397 GSK3AP49840 483 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 RAD23AP54725 363 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 ESRRGP62508 458 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 ELF3P78545 371 aaPredicted RBP9.63□□□□□ -0.87
VCAN-212ENST00000515397 SLC35D3Q5M8T2 416 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 SLX4IPQ5VYV7 408 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 KRT77Q7Z794 578 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 PARP8Q8N3A8 854 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 SPICQ8N5J4 248 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 UBE2FQ969M7 185 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 DUS3LQ96G46 650 aaKnown RBP9.63□□□□□ -0.87
VCAN-212ENST00000515397 LYZL4Q96KX0 146 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 TEX12Q9BXU0 123 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 RASSF4Q9H2L5 321 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 TOR3AQ9H497 397 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 RIBC2Q9H4K1 309 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 C1orf123Q9NWV4 160 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 OPN4Q9UHM6 478 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 METRNQ9UJH8 293 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 LRP12Q9Y561 859 aa9.63□□□□□ -0.87
VCAN-212ENST00000515397 PPIAL4EA0A075B759 164 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 IGHV3OR15-7A0A075B7D8 119 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 A0A0G2JMP0 313 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 A0A0X1KG70 313 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 A6NLC8 198 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 LRRC30A6NM36 301 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 PPIAL4DF5H284 164 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 XRCC2O43543 280 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 PPIAL4FP0DN26 164 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 IRF2P14316 349 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 ACKR3P25106 362 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 CD200P41217 278 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 GMFBP60983 142 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 EFNB1P98172 346 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 ZIK1Q3SY52 487 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms