RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 TCF19Q9Y242 345 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 RBMX2Q9Y388 322 aaKnown RBP3.29□□□□□ -1.88
CAST-242ENST00000515063 IER3IP1Q9Y5U9 82 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 NPTNQ9Y639 398 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 FKBP7Q9Y680 259 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 CLCA3PQ9Y6N3 262 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 V9GY05 133 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 HEATR5AQ86XA9 2040 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 IGKV1D-42A0A075B6H8 117 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 TRAV36DV7A0A075B6V5 113 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 MEIKINA0A087WXM9 373 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 A0A0A6YYC8 382 aaPredicted RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 A0A0A6YYH2 397 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 TRBV2A0A0J9YWF9 115 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 A0A1B0GUH1 482 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 LINC00854A0A1B0GVQ3 168 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 A0A1W2PR77 199 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 A0A1W2PRG6 482 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ANKRD20A5PA0PJZ0 165 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 TRABD2BA6NFA1 517 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 EPOPA6NHQ4 379 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 A6NJ64 397 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 TMEM212A6NML5 194 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 IFITM5A6NNB3 132 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 SNRPGP15A8MWD9 76 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 CDRT15L2A8MXV6 281 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 TMEM150CB9EJG8 249 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 H3BMH7 237 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 I3L1I5 382 aaPredicted RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 M0QZ24 198 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 SULT1C2O00338 296 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 EEF1E1O43324 174 aaKnown RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 ZNF780AO75290 641 aaPredicted RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 KRT33AO76009 404 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 GAS8-AS1O95177 125 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 PAHP00439 452 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 MT-ATP6P00846 226 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 IGHMP01871 453 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 CLPSP04118 112 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 MRPL3P09001 348 aaKnown RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 SULT1A3P0DMM9 295 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 SULT1A4P0DMN0 295 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 CD37P11049 281 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ANXA3P12429 323 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 CPN1P15169 458 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ATF1P18846 271 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 SRMP19623 302 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 PGCP20142 388 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 PSMB1P20618 241 aaKnown RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 CD27P26842 260 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 DPP4P27487 766 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 BTCP35070 178 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 FAUP35544 74 aaKnown RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 RPL4P36578 427 aaKnown RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 ACVR1BP36896 505 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 CAPZA1P52907 286 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 NKX2-5P52952 324 aaPredicted RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 PNLIPRP2P54317 469 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 RASGEF1BQ0VAM2 473 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ZP4Q12836 540 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 SNTB2Q13425 540 aaKnown RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 EIF2S3LQ2VIR3 472 aaKnown RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 SLC25A35Q3KQZ1 300 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 TP53I3Q53FA7 332 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 PAPPA-AS1Q5QFB9 102 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 METTL11BQ5VVY1 283 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 FAM205BPQ63HN1 556 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 OLFML2AQ68BL7 652 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 THOC7Q6I9Y2 204 aaKnown RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 ADAM5Q6NVV9 412 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 FAM199XQ6PEV8 388 aaPredicted RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 DEGS2Q6QHC5 323 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 B3GLCTQ6Y288 498 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 MEX3BQ6ZN04 569 aaKnown RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 SSX6Q7RTT6 188 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 HDDC2Q7Z4H3 204 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 LUZP2Q86TE4 346 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 CDC20BQ86Y33 519 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 MCEMP1Q8IX19 187 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 TIGD4Q8IY51 512 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 SLC7A5P1Q8MH63 180 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 CADM2Q8N3J6 435 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ZNF614Q8N883 585 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 CYB561A3Q8NBI2 242 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 PLPP5Q8NEB5 264 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 DMBX1Q8NFW5 382 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 OR1J2Q8NGS2 313 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 OR5H6Q8NGV6 325 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 OR5J2Q8NH18 312 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 OR51Q1Q8NH59 317 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ANGPTL6Q8NI99 470 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ZNF671Q8TAW3 534 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 GRHL3Q8TE85 626 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 PATE1Q8WXA2 126 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ASB17Q8WXJ9 295 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 DAZLQ92904 295 aaKnown RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 HIST1H2ACQ93077 130 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 TAAR8Q969N4 342 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ADIPOR1Q96A54 375 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms