RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 TMEM165Q9HC07 324 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 UFSP2Q9NUQ7 469 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 MRPL15Q9P015 296 aaKnown RBP20.56■□□□□ 0.88
SNF8-213ENST00000514929 PRODHO43272 600 aa20.55■□□□□ 0.88
SNF8-213ENST00000514929 GMDSO60547 372 aa20.55■□□□□ 0.88
SNF8-213ENST00000514929 RPS2P15880 293 aaKnown RBP20.55■□□□□ 0.88
SNF8-213ENST00000514929 EPHA1P21709 976 aa20.55■□□□□ 0.88
SNF8-213ENST00000514929 TIGD6Q17RP2 521 aa20.55■□□□□ 0.88
SNF8-213ENST00000514929 OR56B2PQ8NGI1 322 aa20.55■□□□□ 0.88
SNF8-213ENST00000514929 AMELYQ99218 206 aa20.55■□□□□ 0.88
SNF8-213ENST00000514929 SLC25A19Q9HC21 320 aa20.55■□□□□ 0.88
SNF8-213ENST00000514929 PAPOLBQ9NRJ5 636 aaKnown RBP20.55■□□□□ 0.88
SNF8-213ENST00000514929 DNAJC27Q9NZQ0 273 aa20.55■□□□□ 0.88
SNF8-213ENST00000514929 PPIAL4AQ9Y536 164 aa20.55■□□□□ 0.88
SNF8-213ENST00000514929 SELENOFO60613 162 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 FAM20BO75063 409 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 ATP5HO75947 161 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 H2BFMP0C1H6 154 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 RPS7P62081 194 aaKnown RBP20.54■□□□□ 0.88
SNF8-213ENST00000514929 MPPED2Q15777 294 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 FAM201AQ5SY85 155 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 RHOUQ7L0Q8 258 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.54■□□□□ 0.88
SNF8-213ENST00000514929 Q8TCH9 128 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 ZNF418Q8TF45 676 aaPredicted RBP20.54■□□□□ 0.88
SNF8-213ENST00000514929 THEM6Q8WUY1 208 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 SPSB4Q96A44 273 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 TMEM246Q9BRR3 403 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 FN3KRPQ9HA64 309 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 MMP26Q9NRE1 261 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 MIOXQ9UGB7 285 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 LRCH1Q9Y2L9 728 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 ARHGAP32A7KAX9 2087 aa20.54■□□□□ 0.88
SNF8-213ENST00000514929 STAB1Q9NY15 2570 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 A0A0A6YYJ9 748 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 A8MXK9 166 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 TRAPPC2LH3BP13 241 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 LYNP07948 512 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 WNT2P09544 360 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 DDOSTP39656 456 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 OPRL1P41146 370 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 ZNF121P58317 390 aaPredicted RBP20.53■□□□□ 0.88
SNF8-213ENST00000514929 SNAPC1Q16533 368 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 SLC35D3Q5M8T2 416 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 FAM57BQ71RH2 274 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 ZNF454Q8N9F8 522 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 OR5K1Q8NHB7 308 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 OTOSQ8NHW6 89 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 DVL3Q92997 716 aaPredicted RBP20.53■□□□□ 0.88
SNF8-213ENST00000514929 UTP4Q969X6 686 aaKnown RBP20.53■□□□□ 0.88
SNF8-213ENST00000514929 REEP6Q96HR9 211 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 BRD7Q9NPI1 651 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 OR5V1Q9UGF6 321 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 OPN4Q9UHM6 478 aa20.53■□□□□ 0.88
SNF8-213ENST00000514929 POLR3KQ9Y2Y1 108 aaPredicted RBP20.53■□□□□ 0.88
SNF8-213ENST00000514929 WNK2Q9Y3S1 2297 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.52■□□□□ 0.88
SNF8-213ENST00000514929 RGS9O75916 674 aaPredicted RBP20.52■□□□□ 0.88
SNF8-213ENST00000514929 FSTL3O95633 263 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 CPT2P23786 658 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 NAA10P41227 235 aaPredicted RBP20.52■□□□□ 0.88
SNF8-213ENST00000514929 CRISP1P54107 249 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 GFOD2Q3B7J2 385 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 ZNF404Q494X3 552 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 FAHD1Q6P587 224 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 SLC16A9Q7RTY1 509 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 KLBQ86Z14 1044 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 SPERTQ8NA61 448 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 BBS1Q8NFJ9 593 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 OR52H1Q8NGJ2 320 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 SGK3Q96BR1 496 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 SSBP3Q9BWW4 388 aaPredicted RBP20.52■□□□□ 0.88
SNF8-213ENST00000514929 OR10A2Q9H208 303 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 MMADHCQ9H3L0 296 aaPredicted RBP20.52■□□□□ 0.88
SNF8-213ENST00000514929 TVP23BQ9NYZ1 205 aa20.52■□□□□ 0.88
SNF8-213ENST00000514929 ANKRD30BLA7E2S9 258 aa20.51■□□□□ 0.87
SNF8-213ENST00000514929 CFL1P23528 166 aaKnown RBP20.51■□□□□ 0.87
SNF8-213ENST00000514929 DAPP51397 102 aa20.51■□□□□ 0.87
SNF8-213ENST00000514929 GNB2P62879 340 aa20.51■□□□□ 0.87
SNF8-213ENST00000514929 FAM3AP98173 230 aa20.51■□□□□ 0.87
SNF8-213ENST00000514929 MZT1Q08AG7 82 aa20.51■□□□□ 0.87
SNF8-213ENST00000514929 C1orf146Q5VVC0 180 aa20.51■□□□□ 0.87
SNF8-213ENST00000514929 NLRC3Q7RTR2 1065 aa20.51■□□□□ 0.87
SNF8-213ENST00000514929 PLPP7Q8NBV4 271 aa20.51■□□□□ 0.87
SNF8-213ENST00000514929 DEFB108BQ8NET1 73 aa20.51■□□□□ 0.87
SNF8-213ENST00000514929 NEIL1Q96FI4 390 aaPredicted RBP20.51■□□□□ 0.87
SNF8-213ENST00000514929 PGAM5Q96HS1 289 aa20.51■□□□□ 0.87
SNF8-213ENST00000514929 RNF7Q9UBF6 113 aa20.51■□□□□ 0.87
SNF8-213ENST00000514929 INSIG2Q9Y5U4 225 aa20.51■□□□□ 0.87
SNF8-213ENST00000514929 VENTXO95231 258 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 PTBP3O95758 552 aaKnown RBP20.5■□□□□ 0.87
SNF8-213ENST00000514929 GRPP07492 148 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 ZNF12P17014 697 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 ZNF154Q13106 437 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 APOFQ13790 326 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 ATP6AP1Q15904 470 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 PRSS45Q7RTY3 260 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 PARP8Q8N3A8 854 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 OR8B3Q8NGG8 313 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 OR8S1Q8NH09 359 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms