RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 USF1P22415 310 aaPredicted RBP11.84□□□□□ -0.51
USP46-209ENST00000514536 RIDAP52758 137 aaKnown RBP11.84□□□□□ -0.51
USP46-209ENST00000514536 GFOD2Q3B7J2 385 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 BIVMQ86UB2 503 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 OR10AD1Q8NGE0 317 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 ITLN1Q8WWA0 313 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 REEP6Q96HR9 211 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 Q96MT0 163 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 MRM2Q9UI43 246 aaKnown RBP11.84□□□□□ -0.51
USP46-209ENST00000514536 IGHV4-61A0A0C4DH41 118 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 H0YHG0 523 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 MLNRO43193 412 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 RP2O75695 350 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 LY6G6DO95868 133 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 DCTDP32321 178 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 TMEM33P57088 247 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 ADARB1P78563 741 aaKnown RBP11.83□□□□□ -0.52
USP46-209ENST00000514536 FAM3AP98173 230 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 IL5RAQ01344 420 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 EGR3Q06889 387 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 LOXL1Q08397 574 aaPredicted RBP11.83□□□□□ -0.52
USP46-209ENST00000514536 HFEQ30201 348 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 TTC23Q5W5X9 447 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 PLEKHG7Q6ZR37 379 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 OR8B12Q8NGG6 310 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 OR56B2PQ8NGI1 322 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 CCL17Q92583 94 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 PPP1R14AQ96A00 147 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 OPA3Q9H6K4 179 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 RNPEPL1Q9HAU8 725 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 AMBNQ9NP70 447 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 FAM206AQ9NX38 181 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 IL19Q9UHD0 177 aa11.83□□□□□ -0.52
USP46-209ENST00000514536 FLNAP21333 2647 aaKnown RBP11.82□□□□□ -0.52
USP46-209ENST00000514536 IGHV3-64DA0A0J9YX35 117 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 ACOD1A6NK06 481 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 F5H5P2 479 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 PPIHO43447 177 aaKnown RBP11.82□□□□□ -0.52
USP46-209ENST00000514536 PNPP00491 289 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 KRT8P05787 483 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 TNFRSF1AP19438 455 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 CA6P23280 308 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 CFL1P23528 166 aaKnown RBP11.82□□□□□ -0.52
USP46-209ENST00000514536 GPR6P46095 362 aaPredicted RBP11.82□□□□□ -0.52
USP46-209ENST00000514536 ZNF85Q03923 595 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 HNRNPA0Q13151 305 aaKnown RBP11.82□□□□□ -0.52
USP46-209ENST00000514536 ZNF829Q3KNS6 432 aaPredicted RBP11.82□□□□□ -0.52
USP46-209ENST00000514536 KRTAP21-3Q3LHN1 58 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 CLEC9AQ6UXN8 241 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 Q71RC1 249 aaPredicted RBP11.82□□□□□ -0.52
USP46-209ENST00000514536 YIPF7Q8N8F6 280 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 APH1BQ8WW43 257 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 NRG4Q8WWG1 115 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 POM121Q96HA1 1249 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 LYZL4Q96KX0 146 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 OR2V2Q96R30 315 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 PBOV1Q9GZY1 135 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 RGCCQ9H4X1 137 aa11.82□□□□□ -0.52
USP46-209ENST00000514536 hCG_38984A0A1B0GV85 526 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 RPP14O95059 124 aaKnown RBP11.81□□□□□ -0.52
USP46-209ENST00000514536 DBTP11182 482 aaKnown RBP11.81□□□□□ -0.52
USP46-209ENST00000514536 RBMXP38159 391 aaKnown RBP11.81□□□□□ -0.52
USP46-209ENST00000514536 DDOSTP39656 456 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 GSK3AP49840 483 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 MMP16P51512 607 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 ZNF91Q05481 1191 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 MFGE8Q08431 387 aaPredicted RBP11.81□□□□□ -0.52
USP46-209ENST00000514536 OR8G1Q15617 311 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 ZNF684Q5T5D7 378 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 ZNF691Q5VV52 312 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 LGALS12Q96DT0 336 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 MEGF10Q96KG7 1140 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 SIGLEC11Q96RL6 698 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 SOX7Q9BT81 388 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 ADI1Q9BV57 179 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 VCXQ9H320 206 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 GTF2A1LQ9UNN4 478 aa11.81□□□□□ -0.52
USP46-209ENST00000514536 EXOGQ9Y2C4 368 aaKnown RBP11.81□□□□□ -0.52
USP46-209ENST00000514536 A0A1B0GWJ7 208 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 DAPL1A0PJW8 107 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 LRP5LA4QPB2 252 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 METTL15A6NJ78 407 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 ANKRD30BLA7E2S9 258 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 J3QRE1 110 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 SRSF10O75494 262 aaKnown RBP11.8□□□□□ -0.52
USP46-209ENST00000514536 WBP4O75554 376 aaKnown RBP11.8□□□□□ -0.52
USP46-209ENST00000514536 CAPGP40121 348 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 SRP9P49458 86 aaKnown RBP11.8□□□□□ -0.52
USP46-209ENST00000514536 MVKQ03426 396 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 SMN1Q16637 294 aaKnown RBP11.8□□□□□ -0.52
USP46-209ENST00000514536 AVPI1Q5T686 147 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 ZNF771Q7L3S4 317 aaPredicted RBP11.8□□□□□ -0.52
USP46-209ENST00000514536 CNIH3Q8TBE1 160 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 DVL3Q92997 716 aaPredicted RBP11.8□□□□□ -0.52
USP46-209ENST00000514536 SLC22A4Q9H015 551 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 DCAF16Q9NXF7 216 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 MRPL15Q9P015 296 aaKnown RBP11.8□□□□□ -0.52
USP46-209ENST00000514536 PPP1R3CQ9UQK1 317 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 RPL36Q9Y3U8 105 aaKnown RBP11.8□□□□□ -0.52
USP46-209ENST00000514536 PCDHGB1Q9Y5G3 927 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms