RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 GUCA1AP43080 201 aaPredicted RBP5.84□□□□□ -1.47
CLDND1-229ENST00000513988 ZNF133P52736 654 aaPredicted RBP5.84□□□□□ -1.47
CLDND1-229ENST00000513988 CAV3P56539 151 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 HOXC5Q00444 222 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 EWSR1Q01844 656 aaKnown RBP eCLIP5.84□□□□□ -1.47
CLDND1-229ENST00000513988 ZNF616Q08AN1 781 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 DYNC1I2Q13409 638 aaKnown RBP5.84□□□□□ -1.47
CLDND1-229ENST00000513988 DGUOKQ16854 277 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 ATPAF1Q5TC12 328 aaPredicted RBP5.84□□□□□ -1.47
CLDND1-229ENST00000513988 C8orf74Q6P047 294 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 CYS1Q717R9 158 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 OR5T2Q8NGG2 359 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 OR1N2Q8NGR9 330 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 OR52P1PQ8NH57 321 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 LRRC29Q8WV35 223 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 SLC7A6Q92536 515 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 STMN2Q93045 179 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 C12orf43Q96C57 262 aaKnown RBP5.84□□□□□ -1.47
CLDND1-229ENST00000513988 OR4C12Q96R67 309 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 ADAT1Q9BUB4 502 aaKnown RBP5.84□□□□□ -1.47
CLDND1-229ENST00000513988 IKZF5Q9H5V7 419 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 ACTR3BQ9P1U1 418 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 CCL27Q9Y4X3 112 aa5.84□□□□□ -1.47
CLDND1-229ENST00000513988 DNAH5Q8TE73 4624 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 A0A0J9YWU9 116 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 MCIDASD6RGH6 385 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 HMGN4O00479 90 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 IGHV1-8P0DP01 117 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 SNAPC1Q16533 368 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 PNLIPRP3Q17RR3 467 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 RFTN2Q52LD8 501 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-229ENST00000513988 TMEM177Q53S58 311 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 RNF220Q5VTB9 566 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 ZNF626Q68DY1 528 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 STUMQ69YW2 141 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 C3orf62Q6ZUJ4 267 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 GTSCR1Q86UQ5 136 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 HAPLN4Q86UW8 402 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 ZDHHC23Q8IYP9 409 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 CLIP4Q8N3C7 705 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 GVQW1Q8N7I0 195 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 OR13D1Q8NGV5 346 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 BBS10Q8TAM1 723 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 NDNFQ8TB73 568 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 SPRYD4Q8WW59 207 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-229ENST00000513988 APOBEC3DQ96AK3 386 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-229ENST00000513988 SEH1LQ96EE3 360 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 DESI2Q9BSY9 194 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 MRPL13Q9BYD1 178 aaKnown RBP5.83□□□□□ -1.48
CLDND1-229ENST00000513988 SLC22A4Q9H015 551 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 PAIP1Q9H074 479 aaKnown RBP5.83□□□□□ -1.48
CLDND1-229ENST00000513988 DNTTIP1Q9H147 329 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 ARMC7Q9H6L4 198 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 SMURF2Q9HAU4 748 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 SLCO1B3Q9NPD5 702 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 PLA2G2DQ9UNK4 145 aa5.83□□□□□ -1.48
CLDND1-229ENST00000513988 ZNF443Q9Y2A4 671 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-229ENST00000513988 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-229ENST00000513988 A0A1B0GWA3 101 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 MAGEA13PA6NCF6 341 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 GMNCA6NCL1 334 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 CENPBD1B2RD01 187 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.82□□□□□ -1.48
CLDND1-229ENST00000513988 SGCEO43556 437 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 GMDSO60547 372 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 TRMUO75648 421 aaKnown RBP5.82□□□□□ -1.48
CLDND1-229ENST00000513988 MBD3O95983 291 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 MT-ATP6P00846 226 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 TFAP2AP05549 437 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 GSTA1P08263 222 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 GSTA2P09210 222 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 OR8U9P0C7N5 309 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 NR2F1P10589 423 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 ACADSP16219 412 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 TAC1P20366 129 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 BRS3P32247 399 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 GRK5P34947 590 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 KIR3DL2P43630 455 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 ZNF45Q02386 682 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 FMODQ06828 376 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 CD47Q08722 323 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 SCRN3Q0VDG4 424 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 FOXE3Q13461 319 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 IL18R1Q13478 541 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 GPR50Q13585 617 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 ENDOGQ14249 297 aaKnown RBP5.82□□□□□ -1.48
CLDND1-229ENST00000513988 ALG10BQ5I7T1 473 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 LINC00322Q6ZN03 302 aaPredicted RBP5.82□□□□□ -1.48
CLDND1-229ENST00000513988 ZNF788Q6ZQV5 615 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 HDDC2Q7Z4H3 204 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 FOXRED2Q8IWF2 684 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 CLECL1Q8IZS7 167 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 STPG2Q8N412 459 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 OR4A15Q8NGL6 344 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 DNAJA4Q8WW22 397 aaPredicted RBP5.82□□□□□ -1.48
CLDND1-229ENST00000513988 ARPC1AQ92747 370 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 GAFA1Q96PS6 74 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 SEPHS2Q99611 448 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 DUSP26Q9BV47 211 aa5.82□□□□□ -1.48
CLDND1-229ENST00000513988 NUF2Q9BZD4 464 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms