RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 SLC15A1P46059 708 aa13.85□□□□□ -0.19
DDX41-213ENST00000512027 LRRN1Q6UXK5 716 aa13.85□□□□□ -0.19
DDX41-213ENST00000512027 PRSS45Q7RTY3 260 aa13.85□□□□□ -0.19
DDX41-213ENST00000512027 LRRC28Q86X40 367 aaPredicted RBP13.85□□□□□ -0.19
DDX41-213ENST00000512027 PYDC1Q8WXC3 89 aa13.85□□□□□ -0.19
DDX41-213ENST00000512027 DNAJC9Q8WXX5 260 aa13.85□□□□□ -0.19
DDX41-213ENST00000512027 PPP1R3EQ9H7J1 279 aa13.85□□□□□ -0.19
DDX41-213ENST00000512027 SAC3D1A6NKF1 404 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 CEACAM18A8MTB9 384 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 PRR32B1ATL7 298 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 PSMD9O00233 223 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 FAM20BO75063 409 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 ANPEPP15144 967 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 ADRA2CP18825 462 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 PCMT1P22061 227 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 CD200P41217 278 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 RAD23AP54725 363 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 FAM3AP98173 230 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 TIGD6Q17RP2 521 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 TMEM155Q4W5P6 130 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 SLC35D3Q5M8T2 416 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 KDM4DQ6B0I6 523 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 SLC16A9Q7RTY1 509 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 PHC2Q8IXK0 858 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 SGK3Q96BR1 496 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 REEP6Q96HR9 211 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 TMPRSS13Q9BYE2 586 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 GABARAPL1Q9H0R8 117 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 TOR3AQ9H497 397 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 METTL17Q9H7H0 456 aaPredicted RBP13.84□□□□□ -0.19
DDX41-213ENST00000512027 PATZ1Q9HBE1 687 aaKnown RBP13.84□□□□□ -0.19
DDX41-213ENST00000512027 STAB1Q9NY15 2570 aa13.84□□□□□ -0.19
DDX41-213ENST00000512027 XRCC2O43543 280 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 RGS9O75916 674 aaPredicted RBP13.83□□□□□ -0.2
DDX41-213ENST00000512027 POLR2IP36954 125 aaKnown RBP13.83□□□□□ -0.2
DDX41-213ENST00000512027 MDH2P40926 338 aaKnown RBP13.83□□□□□ -0.2
DDX41-213ENST00000512027 GATA4P43694 442 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 ESRRGP62508 458 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 KRTAP24-1Q3LI83 254 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 DCAF12L2Q5VW00 463 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 SLX4IPQ5VYV7 408 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 CCDC121Q6ZUS5 278 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 ZDHHC13Q8IUH4 622 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 KLHL36Q8N4N3 616 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 SPICQ8N5J4 248 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 RFLNBQ8N5W9 214 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 TCEANCQ8N8B7 351 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 SPSB4Q96A44 273 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 PGAM5Q96HS1 289 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 TEAD3Q99594 435 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 CIB1Q99828 191 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 TEX12Q9BXU0 123 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 TMEM165Q9HC07 324 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 MMP26Q9NRE1 261 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 OAZ3Q9UMX2 235 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 COPS3Q9UNS2 423 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 LRP12Q9Y561 859 aa13.83□□□□□ -0.2
DDX41-213ENST00000512027 A0A0G2JMP0 313 aa13.82□□□□□ -0.2
DDX41-213ENST00000512027 A0A0X1KG70 313 aa13.82□□□□□ -0.2
DDX41-213ENST00000512027 hCG_38984A0A1B0GV85 526 aa13.82□□□□□ -0.2
DDX41-213ENST00000512027 ZAR1LA6NP61 321 aa13.82□□□□□ -0.2
DDX41-213ENST00000512027 F5H0A9 414 aaPredicted RBP13.82□□□□□ -0.2
DDX41-213ENST00000512027 KPNB1Q14974 876 aaKnown RBP13.82□□□□□ -0.2
DDX41-213ENST00000512027 C12orf73Q69YU5 71 aa13.82□□□□□ -0.2
DDX41-213ENST00000512027 ZNF826PQ6ZT77 177 aa13.82□□□□□ -0.2
DDX41-213ENST00000512027 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.82□□□□□ -0.2
DDX41-213ENST00000512027 ZNF454Q8N9F8 522 aa13.82□□□□□ -0.2
DDX41-213ENST00000512027 BOLLQ8N9W6 283 aaKnown RBP13.82□□□□□ -0.2
DDX41-213ENST00000512027 OR4M2Q8NGB6 313 aa13.82□□□□□ -0.2
DDX41-213ENST00000512027 IL4I1Q96RQ9 567 aa13.82□□□□□ -0.2
DDX41-213ENST00000512027 TMEM246Q9BRR3 403 aa13.82□□□□□ -0.2
DDX41-213ENST00000512027 MRPL15Q9P015 296 aaKnown RBP13.82□□□□□ -0.2
DDX41-213ENST00000512027 LAMP5Q9UJQ1 280 aa13.82□□□□□ -0.2
DDX41-213ENST00000512027 TRAPPC2LH3BP13 241 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 GMDSO60547 372 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 GRPP07492 148 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 FCGR1AP12314 374 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 ALOX5APP20292 161 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 CD80P33681 288 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 GSK3AP49840 483 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 LYPD2Q6UXB3 125 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 KRT77Q7Z794 578 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 WDR86Q86TI4 376 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 MUC20Q8N307 709 aaPredicted RBP13.81□□□□□ -0.2
DDX41-213ENST00000512027 CELF2-AS1Q8N7Q2 184 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 DEFB108BQ8NET1 73 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 OR8B12Q8NGG6 310 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 LYZL4Q96KX0 146 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 PKP2Q99959 881 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 OR10A2Q9H208 303 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 OPA3Q9H6K4 179 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 OPN4Q9UHM6 478 aa13.81□□□□□ -0.2
DDX41-213ENST00000512027 DOCK11Q5JSL3 2073 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 PPIAL4EA0A075B759 164 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 LRRC30A6NM36 301 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 PPIAL4DF5H284 164 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 H3BNX3 289 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 IFNL4K9M1U5 179 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 MAGEB4O15481 346 aaPredicted RBP13.8□□□□□ -0.2
DDX41-213ENST00000512027 FOXH1O75593 365 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms