RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 SLC25A26Q70HW3 274 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 PTRH1Q86Y79 214 aaKnown RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 PELI1Q96FA3 418 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 ATOH8Q96SQ7 321 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 CHST6Q9GZX3 395 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 CXorf36Q9H7Y0 433 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 POMT1Q9Y6A1 747 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 CXorf51AA0A1B0GTR3 108 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 LOC107986453A0A1B0GWG9 222 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 FAM221AA4D161 298 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 POM121CA8CG34 1229 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 PPP5D1E7EU14 171 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 M0R1X1 148 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 ICOSLGO75144 302 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 GJB3O75712 270 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 MBP02144 154 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 GABRA1P14867 456 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 OPRK1P41145 380 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 PPP2CAP67775 309 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 NAAAQ02083 359 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 MRPL58Q14197 206 aaKnown RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 AGERQ15109 404 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 KCNMB1Q16558 191 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 PCK2Q16822 640 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 CEACAM16Q2WEN9 425 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 AFMIDQ63HM1 303 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 ADAM5Q6NVV9 412 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 DGAT2L6Q6ZPD8 337 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 FA2HQ7L5A8 372 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 SLC24A4Q8NFF2 622 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 RPL3LQ92901 407 aaKnown RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 UBE2FQ969M7 185 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 APOBEC3DQ96AK3 386 aaPredicted RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 DDOQ99489 341 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 PLA2G12AQ9BZM1 189 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 GPR84Q9NQS5 396 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 DUSP22Q9NRW4 184 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 COA4Q9NYJ1 87 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 FZR1Q9UM11 496 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 DNAJC13O75165 2243 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 IGKV3-7A0A075B6H7 116 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 TMEM30CPA0ZSE6 113 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 ITGAMP11215 1152 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 ALOX5APP20292 161 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 GPX3P22352 226 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 CASP3P42574 277 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 KIR2DL1P43626 348 aaPredicted RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 KIR2DL2P43627 348 aaPredicted RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 ASCL1P50553 236 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 PAX5Q02548 391 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 RNPS1Q15287 305 aaKnown RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 WIPI1Q5MNZ9 446 aaPredicted RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 ACOT7LQ6ZUV0 252 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 CCDC190Q86UF4 302 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 GALNT16Q8N428 558 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 MARCH5Q9NX47 278 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 C1RLQ9NZP8 487 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 HDGFL3Q9Y3E1 203 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 MN1Q10571 1320 aaPredicted RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 ARID1BQ8NFD5 2236 aaPredicted RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 MASP2O00187 686 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 SIAH2O43255 324 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 DHHO43323 396 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 TNFSF14O43557 240 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 GATCO43716 136 aaKnown RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 SOD1P00441 154 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 HRASP01112 189 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 OR13C7P0DN81 318 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 EPXP11678 715 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 COX5AP20674 150 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 HTR1FP30939 366 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 GFERP55789 205 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 KLF3P57682 345 aaPredicted RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 ACVR1Q04771 509 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 BAMBIQ13145 260 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 TRMT12Q53H54 448 aaKnown RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 LCN15Q6UWW0 184 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 TMEM182Q6ZP80 229 aaPredicted RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 OR2L13Q8N349 312 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 TMEM102Q8N9M5 508 aaPredicted RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 LFNGQ8NES3 379 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 OR13G1Q8NGZ3 307 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 BAHD1Q8TBE0 780 aaPredicted RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 PLPPR2Q96GM1 343 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 FCRL1Q96LA6 429 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 GABARAPL1Q9H0R8 117 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 OCIAD1Q9NX40 245 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 TAS2R4Q9NYW5 299 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 WNT16Q9UBV4 365 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 ICAM5Q9UMF0 924 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 SIPA1L1O43166 1804 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 FITM1A5D6W6 292 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 DCTN6O00399 190 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 ADAM20O43506 726 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 SSSCA1O60232 199 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 SEMA7AO75326 666 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 NPY1RP25929 384 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 OPRM1P35372 400 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 PIGAP37287 484 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms