RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 SUCNR1Q9BXA5 334 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 OR51V1Q9H2C8 321 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 TOR3AQ9H497 397 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 YY1AP1Q9H869 796 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 MARCH7Q9H992 704 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 ZNF556Q9HAH1 456 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 MRPL15Q9P015 296 aaKnown RBP19.23■□□□□ 0.67
SNF8-209ENST00000510558 AUP1Q9Y679 476 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 GMDSO60547 372 aa19.22■□□□□ 0.67
SNF8-209ENST00000510558 HSD11B1P28845 292 aa19.22■□□□□ 0.67
SNF8-209ENST00000510558 CX3CR1P49238 355 aa19.22■□□□□ 0.67
SNF8-209ENST00000510558 CBX1P83916 185 aa19.22■□□□□ 0.67
SNF8-209ENST00000510558 ARMCX4Q5H9R4 360 aa19.22■□□□□ 0.67
SNF8-209ENST00000510558 TIGD4Q8IY51 512 aa19.22■□□□□ 0.67
SNF8-209ENST00000510558 BPIFB2Q8N4F0 458 aa19.22■□□□□ 0.67
SNF8-209ENST00000510558 OR56B2PQ8NGI1 322 aa19.22■□□□□ 0.67
SNF8-209ENST00000510558 RNF133Q8WVZ7 376 aa19.22■□□□□ 0.67
SNF8-209ENST00000510558 DVL3Q92997 716 aaPredicted RBP19.22■□□□□ 0.67
SNF8-209ENST00000510558 MRI1Q9BV20 369 aa19.22■□□□□ 0.67
SNF8-209ENST00000510558 ABHD6Q9BV23 337 aa19.22■□□□□ 0.67
SNF8-209ENST00000510558 POMPQ9Y244 141 aa19.22■□□□□ 0.67
SNF8-209ENST00000510558 TCRBV3S1A0A5B6 114 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 PRR23D1E9PI22 279 aaPredicted RBP19.21■□□□□ 0.67
SNF8-209ENST00000510558 TBX1O43435 398 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 FKBP6O75344 327 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 DNAJC8O75937 253 aaPredicted RBP19.21■□□□□ 0.67
SNF8-209ENST00000510558 ANXA2P07355 339 aaKnown RBP19.21■□□□□ 0.67
SNF8-209ENST00000510558 PRR23D2P0DMB1 279 aaPredicted RBP19.21■□□□□ 0.67
SNF8-209ENST00000510558 OSMP13725 252 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 PRKACGP22612 351 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 GNB2P62879 340 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 SHFQ7M4L6 423 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 OR8B3Q8NGG8 313 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 C22orf15Q8WYQ4 148 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 SPSB4Q96A44 273 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 PLEKHA8Q96JA3 519 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 OR8B2Q96RD0 313 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 JMJD8Q96S16 334 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 FN3KRPQ9HA64 309 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 DNAJB9Q9UBS3 223 aa19.21■□□□□ 0.67
SNF8-209ENST00000510558 PTBP3O95758 552 aaKnown RBP19.2■□□□□ 0.66
SNF8-209ENST00000510558 ANXA8P13928 327 aa19.2■□□□□ 0.66
SNF8-209ENST00000510558 FPR2P25090 351 aa19.2■□□□□ 0.66
SNF8-209ENST00000510558 CDK5Q00535 292 aa19.2■□□□□ 0.66
SNF8-209ENST00000510558 PLBD1Q6P4A8 553 aa19.2■□□□□ 0.66
SNF8-209ENST00000510558 NLRC3Q7RTR2 1065 aa19.2■□□□□ 0.66
SNF8-209ENST00000510558 PAPD5Q8NDF8 572 aaKnown RBP19.2■□□□□ 0.66
SNF8-209ENST00000510558 C19orf18Q8NEA5 215 aa19.2■□□□□ 0.66
SNF8-209ENST00000510558 ZMYND19Q96E35 227 aaPredicted RBP19.2■□□□□ 0.66
SNF8-209ENST00000510558 AMELYQ99218 206 aa19.2■□□□□ 0.66
SNF8-209ENST00000510558 RNF7Q9UBF6 113 aa19.2■□□□□ 0.66
SNF8-209ENST00000510558 TRIM77I1YAP6 450 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 APOC1P02654 83 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 HMGN1P05114 100 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 DDOSTP39656 456 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 PAX2Q02962 417 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 TIGD6Q17RP2 521 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 DCDC5Q6ZRR9 648 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 SLC16A9Q7RTY1 509 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 SPERTQ8NA61 448 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 PLPP7Q8NBV4 271 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 SP140LQ9H930 580 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 DNAJC27Q9NZQ0 273 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 NUP50Q9UKX7 468 aa19.19■□□□□ 0.66
SNF8-209ENST00000510558 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.18■□□□□ 0.66
SNF8-209ENST00000510558 SELENOFO60613 162 aa19.18■□□□□ 0.66
SNF8-209ENST00000510558 CD80P33681 288 aa19.18■□□□□ 0.66
SNF8-209ENST00000510558 OPRL1P41146 370 aa19.18■□□□□ 0.66
SNF8-209ENST00000510558 PITPNBP48739 271 aa19.18■□□□□ 0.66
SNF8-209ENST00000510558 ZNF121P58317 390 aaPredicted RBP19.18■□□□□ 0.66
SNF8-209ENST00000510558 FAM3AP98173 230 aa19.18■□□□□ 0.66
SNF8-209ENST00000510558 HOXA4Q00056 320 aaPredicted RBP19.18■□□□□ 0.66
SNF8-209ENST00000510558 PAX8Q06710 450 aa19.18■□□□□ 0.66
SNF8-209ENST00000510558 KLF17Q5JT82 389 aaPredicted RBP19.18■□□□□ 0.66
SNF8-209ENST00000510558 LYPD2Q6UXB3 125 aa19.18■□□□□ 0.66
SNF8-209ENST00000510558 FAM57BQ71RH2 274 aa19.18■□□□□ 0.66
SNF8-209ENST00000510558 RHOUQ7L0Q8 258 aa19.18■□□□□ 0.66
SNF8-209ENST00000510558 PRSS45Q7RTY3 260 aa19.18■□□□□ 0.66
SNF8-209ENST00000510558 REEP6Q96HR9 211 aa19.18■□□□□ 0.66
SNF8-209ENST00000510558 IGHV2-70DA0A0C4DH43 119 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 ANKRD30BLA7E2S9 258 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 HAX1O00165 279 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 PRODHO43272 600 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 H2BFMP0C1H6 154 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 ACTG1P63261 375 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 KLHL12Q53G59 568 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 BTNL3Q6UXE8 466 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 CPOQ8IVL8 374 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 BOLLQ8N9W6 283 aaKnown RBP19.17■□□□□ 0.66
SNF8-209ENST00000510558 OR52H1Q8NGJ2 320 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 OTOSQ8NHW6 89 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 FAM216AQ8WUB2 273 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 RAB40AQ8WXH6 277 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 DACT3Q96B18 629 aaPredicted RBP19.17■□□□□ 0.66
SNF8-209ENST00000510558 SGK3Q96BR1 496 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 CADM1Q9BY67 442 aaKnown RBP19.17■□□□□ 0.66
SNF8-209ENST00000510558 SLC25A19Q9HC21 320 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 BRD7Q9NPI1 651 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 ESM1Q9NQ30 184 aa19.17■□□□□ 0.66
SNF8-209ENST00000510558 CLN8Q9UBY8 286 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms