RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 SLC2A1P11166 492 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 ENTPD1P49961 510 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 MNAT1P51948 309 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 GNGT1P63211 74 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 HOXA4Q00056 320 aaPredicted RBP12.81□□□□□ -0.36
TPM3-219ENST00000509409 DEFB112Q30KQ8 113 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 ZNF362Q5T0B9 420 aaPredicted RBP12.81□□□□□ -0.36
TPM3-219ENST00000509409 BRD3OSQ6XYD6 125 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 ZNF511Q8NB15 262 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 AQP11Q8NBQ7 271 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 PLPP7Q8NBV4 271 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 OR8D4Q8NGM9 314 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 OR6K6Q8NGW6 343 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 TAF15Q92804 592 aaKnown RBP eCLIP12.81□□□□□ -0.36
TPM3-219ENST00000509409 SLAMF6Q96DU3 332 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 KCNJ15Q99712 375 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 TRIM36Q9NQ86 728 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 MRPL15Q9P015 296 aaKnown RBP12.81□□□□□ -0.36
TPM3-219ENST00000509409 ACTR3BQ9P1U1 418 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 C5orf63A6NC05 138 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 POM121CA8CG34 1229 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 C22orf46C9J442 243 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 HOXA3O43365 443 aaPredicted RBP12.8□□□□□ -0.36
TPM3-219ENST00000509409 IFNGP01579 166 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 PSMB10P40306 273 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 GYS2P54840 703 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 CRMP1Q14194 572 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 OR56B2PQ8NGI1 322 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 OR8S1Q8NH09 359 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 DACT3Q96B18 629 aaPredicted RBP12.8□□□□□ -0.36
TPM3-219ENST00000509409 OTULINQ96BN8 352 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 RASSF4Q9H2L5 321 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 C14orf119Q9NWQ9 140 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 BAIAP2Q9UQB8 552 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 COMMD3-BMI1R4GMX3 469 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 U3KQV3 271 aa12.8□□□□□ -0.36
TPM3-219ENST00000509409 OOEPA6NGQ2 149 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 ANKRD30BLA7E2S9 258 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 B2RBV5 119 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 XRCC2O43543 280 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 NDUFA2O43678 99 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 TOX4O94842 621 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 SOX14O95416 240 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 GYPAP02724 150 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 CRYBA1P05813 215 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 LIPFP07098 398 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 ANXA2P07355 339 aaKnown RBP12.79□□□□□ -0.36
TPM3-219ENST00000509409 PSKH1P11801 424 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 SPI1P17947 270 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 ATP6V1B2P21281 511 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 OMGP23515 440 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 HSD11B1P28845 292 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 OTX1P32242 354 aaPredicted RBP12.79□□□□□ -0.36
TPM3-219ENST00000509409 SLC15A1P46059 708 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 SLC25A1P53007 311 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 BPIFB3P59826 476 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 POU4F2Q12837 409 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 EIF2B1Q14232 305 aaKnown RBP12.79□□□□□ -0.36
TPM3-219ENST00000509409 ZNF826PQ6ZT77 177 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 PIGWQ7Z7B1 504 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 OR2T33Q8NG76 320 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 OR4Q3Q8NH05 313 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 TMIGD2Q96BF3 282 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 OPA3Q9H6K4 179 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 ZNF696Q9H7X3 374 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 REEP1Q9H902 201 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 SP140LQ9H930 580 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 ARMC1Q9NVT9 282 aa12.79□□□□□ -0.36
TPM3-219ENST00000509409 SAMHD1Q9Y3Z3 626 aaKnown RBP12.79□□□□□ -0.36
TPM3-219ENST00000509409 RIIAD1A6NNX1 92 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 ZNF879B4DU55 563 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 ZNF878C9JN71 531 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 P2RY10O00398 339 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 CLUP10909 449 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 ANOS1P23352 680 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 GRK5P34947 590 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 CFHR2P36980 270 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 DDOSTP39656 456 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 CX3CR1P49238 355 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 BLVRAP53004 296 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 GRB2P62993 217 aaKnown RBP12.78□□□□□ -0.36
TPM3-219ENST00000509409 TIGD6Q17RP2 521 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 MICAQ29983 383 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 FAM98BQ52LJ0 330 aaKnown RBP12.78□□□□□ -0.36
TPM3-219ENST00000509409 TEX30Q5JUR7 227 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 PRR31Q5SQ13 230 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 RUSC1-AS1Q66K80 236 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 ZNF770Q6IQ21 691 aaPredicted RBP12.78□□□□□ -0.36
TPM3-219ENST00000509409 DHFR2Q86XF0 187 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 PNLDC1Q8NA58 520 aaKnown RBP12.78□□□□□ -0.36
TPM3-219ENST00000509409 CTSZQ9UBR2 303 aa12.78□□□□□ -0.36
TPM3-219ENST00000509409 IGHV3OR15-7A0A075B7D8 119 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 DHRS12A0PJE2 317 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 WIPF1O43516 503 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 PTBP3O95758 552 aaKnown RBP12.77□□□□□ -0.37
TPM3-219ENST00000509409 SFTPBP07988 381 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 ZNF3P17036 446 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 MDKP21741 143 aaPredicted RBP12.77□□□□□ -0.37
TPM3-219ENST00000509409 MAGEA2P43356 314 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 PCK2Q16822 640 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms