RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 THBS2P35442 1172 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 DDOSTP39656 456 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 CD200P41217 278 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 ZMYND11Q15326 602 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 TMEM155Q4W5P6 130 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 IL17RELQ6ZVW7 336 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 FAM57BQ71RH2 274 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 MOGAT3Q86VF5 341 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 GLCCI1Q86VQ1 547 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 OR52H1Q8NGJ2 320 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 OR51F2Q8NH61 342 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 TMEM163Q8TC26 289 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 ERGIC1Q969X5 290 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 RAB39BQ96DA2 213 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 IL4I1Q96RQ9 567 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 MDFIQ99750 246 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 MRPL15Q9P015 296 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 H2AFY2Q9P0M6 372 aaPredicted RBP13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 TRAV20A0A0B4J274 112 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 SAC3D1A6NKF1 404 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 TBX1O43435 398 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 FSTL3O95633 263 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 IFNA2P01563 188 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 MMP16P51512 607 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 RAD23AP54725 363 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 OR8G1Q15617 311 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 MPPED2Q15777 294 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 NXNL2Q5VZ03 156 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 ZFP1Q6P2D0 407 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 DEGS2Q6QHC5 323 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 LRRN1Q6UXK5 716 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 C10orf67Q8IYJ2 551 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 Q8TCH9 128 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 REEP6Q96HR9 211 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 GAL3ST1Q99999 423 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 OR10A2Q9H208 303 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 OPA3Q9H6K4 179 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 PATZ1Q9HBE1 687 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 BRD7Q9NPI1 651 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 G6PC2Q9NQR9 355 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 HAO2Q9NYQ3 351 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 UBAP1Q9NZ09 502 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 DNAJC27Q9NZQ0 273 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 ENOPH1Q9UHY7 261 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 LAMP5Q9UJQ1 280 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 CUBNO60494 3623 aa13.56□□□□□ -0.24
PDLIM5-212ENST00000509333 TANC2Q9HCD6 1990 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 ISPDA4D126 451 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 PRR32B1ATL7 298 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 M0R129 80 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 CYB5R3P00387 301 aaPredicted RBP13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 AVPP01185 164 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 WNT2P09544 360 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 PCMT1P22061 227 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 ZFP36P26651 326 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 GSK3AP49840 483 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 BTG1P62324 171 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 ROM1Q03395 351 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 TIGD6Q17RP2 521 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 SPERTQ8NA61 448 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 PLPP7Q8NBV4 271 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 OR56B2PQ8NGI1 322 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 PGAM5Q96HS1 289 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 RBM4BQ9BQ04 359 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 GABARAPL3Q9BY60 117 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 PRRG3Q9BZD7 231 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 NIPAL2Q9H841 368 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 COPS3Q9UNS2 423 aa13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 NOP16Q9Y3C1 178 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-212ENST00000509333 ACOD1A6NK06 481 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 E9PQ18 207 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 ZNF205O95201 554 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 ALPLP05186 524 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 MRPL3P09001 348 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 SRD5A1P18405 259 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 DCTDP32321 178 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 MDH2P40926 338 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 FAM201AQ5SY85 155 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 FAHD2BQ6P2I3 314 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 KCTD18Q6PI47 426 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 C1orf229Q6ZS94 237 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 KRT77Q7Z794 578 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 KLBQ86Z14 1044 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 C11orf53Q8IXP5 236 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 KLHL36Q8N4N3 616 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 SPICQ8N5J4 248 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 UBE2FQ969M7 185 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 FAHD2AQ96GK7 314 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 RGCCQ9H4X1 137 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 PCDHB10Q9UN67 800 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 LRP12Q9Y561 859 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 TMEM14AQ9Y6G1 99 aa13.54□□□□□ -0.24
PDLIM5-212ENST00000509333 PPIAL4EA0A075B759 164 aa13.53□□□□□ -0.24
PDLIM5-212ENST00000509333 hCG_38984A0A1B0GV85 526 aa13.53□□□□□ -0.24
PDLIM5-212ENST00000509333 SLC22A31A6NKX4 558 aa13.53□□□□□ -0.24
PDLIM5-212ENST00000509333 LRRC30A6NM36 301 aa13.53□□□□□ -0.24
PDLIM5-212ENST00000509333 F5H0A9 414 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-212ENST00000509333 PPIAL4DF5H284 164 aa13.53□□□□□ -0.24
PDLIM5-212ENST00000509333 PSMD9O00233 223 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms