RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 OR52A1Q9UKL2 312 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 RPH3AQ9Y2J0 694 aaPredicted RBP9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 A0A1W2PNR3 127 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 OR5H14A6NHG9 310 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 ZNF735P0CB33 412 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 POU3F2P20265 443 aaPredicted RBP9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 HSD11B1P28845 292 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 SFTPDP35247 375 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 GPR85P60893 370 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 ASPHD2Q6ICH7 369 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 BIVMQ86UB2 503 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 TMEM17Q86X19 198 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 TMEM156Q8N614 296 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 FADS6Q8N9I5 356 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 ST8SIA2Q92186 375 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 ST8SIA4Q92187 359 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 AQP3Q92482 292 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 DVL3Q92997 716 aaPredicted RBP9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 FAM46BQ96A09 425 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 LIN37Q96GY3 246 aaPredicted RBP9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 C5orf34Q96MH7 638 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 UQCC2Q9BRT2 126 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 ZPBPQ9BS86 351 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 DDA1Q9BW61 102 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 CHST6Q9GZX3 395 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 PROK2Q9HC23 129 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 CHST11Q9NPF2 352 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 TMEM9BQ9NQ34 198 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 PLEKHA6Q9Y2H5 1048 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 MRPS18BQ9Y676 258 aaKnown RBP9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 CTRB1P17538 263 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 STARP49675 285 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 MMP16P51512 607 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 MLF1P58340 268 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 OC90Q02509 493 aaPredicted RBP9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 MFGE8Q08431 387 aaPredicted RBP9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 LY6G6FQ5SQ64 297 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 ATPAF1Q5TC12 328 aaPredicted RBP9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 CDCP2Q5VXM1 449 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 CTRB2Q6GPI1 263 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 C11orf87Q6NUJ2 197 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 SLC25A42Q86VD7 318 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 ZBTB8AQ96BR9 441 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 WDR89Q96FK6 387 aaPredicted RBP9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 JSRP1Q96MG2 331 aaPredicted RBP9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 OR5B2Q96R09 309 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 EMC6Q9BV81 110 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 SPRY4Q9C004 299 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 PTGES2Q9H7Z7 377 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 RASL12Q9NYN1 266 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 FBLN5Q9UBX5 448 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 PRELID1Q9Y255 219 aa9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 COA3Q9Y2R0 106 aaPredicted RBP9.77□□□□□ -0.85
SH3RF1-203ENST00000508685 MEIS3P1A6NDR6 274 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 ZNF814B7Z6K7 855 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 NPIPA5E9PKD4 350 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 CDK2AP1O14519 115 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 TSPAN4O14817 238 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 MPZL1O95297 269 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 BPNT1O95861 308 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 IL2RAP01589 272 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 ERCC1P07992 297 aaPredicted RBP9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 KLK2P20151 261 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 BDKRB2P30411 391 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 HSF1Q00613 529 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 DHRS2Q13268 280 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 RNASE10Q5GAN6 216 aaKnown RBP9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 UQCC3Q6UW78 93 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 ACOT7LQ6ZUV0 252 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 TMED4Q7Z7H5 227 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 LYG2Q86SG7 212 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 LYPD6Q86Y78 171 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 JAGN1Q8N5M9 183 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 SLC26A10Q8NG04 563 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 PAQR8Q8TEZ7 354 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 ASB10Q8WXI3 467 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 SH2D2AQ9NP31 389 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 G6PC2Q9NQR9 355 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 SERINC1Q9NRX5 453 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 HPF1Q9NWY4 346 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 ALKBH4Q9NXW9 302 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 B3GAT1Q9P2W7 334 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 GDF2Q9UK05 429 aaPredicted RBP9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 NPIPA1Q9UND3 350 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 TNFSF18Q9UNG2 199 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 FARSAQ9Y285 508 aaKnown RBP9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 EMC9Q9Y3B6 208 aa9.76□□□□□ -0.85
SH3RF1-203ENST00000508685 FREM3P0C091 2139 aa9.75□□□□□ -0.85
SH3RF1-203ENST00000508685 PRRC2CQ9Y520 2896 aaKnown RBP9.75□□□□□ -0.85
SH3RF1-203ENST00000508685 TRAV14DV4A0A0A6YYC5 116 aa9.75□□□□□ -0.85
SH3RF1-203ENST00000508685 IGKV1D-43A0A0B4J1Z2 117 aa9.75□□□□□ -0.85
SH3RF1-203ENST00000508685 TMEM269A0A1B0GVZ9 245 aa9.75□□□□□ -0.85
SH3RF1-203ENST00000508685 LOC107986453A0A1B0GWG9 222 aa9.75□□□□□ -0.85
SH3RF1-203ENST00000508685 DCDC2BA2VCK2 349 aa9.75□□□□□ -0.85
SH3RF1-203ENST00000508685 BCL2L11O43521 198 aa9.75□□□□□ -0.85
SH3RF1-203ENST00000508685 MT-CO3P00414 261 aa9.75□□□□□ -0.85
SH3RF1-203ENST00000508685 H2BFMP0C1H6 154 aa9.75□□□□□ -0.85
SH3RF1-203ENST00000508685 ATF4P18848 351 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms