RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 NUFIP1Q9UHK0 495 aaKnown RBP7.8□□□□□ -1.16
NUP54-207ENST00000508583 COPS3Q9UNS2 423 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 EXOGQ9Y2C4 368 aaKnown RBP7.8□□□□□ -1.16
NUP54-207ENST00000508583 KLHDC2Q9Y2U9 406 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 RRP15Q9Y3B9 282 aaKnown RBP7.8□□□□□ -1.16
NUP54-207ENST00000508583 SNX5Q9Y5X3 404 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 R4GMQ9 66 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 AKAP9Q99996 3911 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 ZSCAN5BA6NJL1 495 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 CD300LBA8K4G0 201 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 PSMD9O00233 223 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 GMDSO60547 372 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 IGHV1-46P01743 117 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 HEXAP06865 529 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 SLC2A1P11166 492 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 ZNF12P17014 697 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 DCKP27707 260 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 GNALP38405 381 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 HCCSP53701 268 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 TMEM33P57088 247 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 ISL1P61371 349 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 CCL8P80075 99 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 TNFAIP6P98066 277 aaPredicted RBP7.79□□□□□ -1.16
NUP54-207ENST00000508583 ZNF92Q03936 586 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 CDK5R2Q13319 367 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 GALEQ14376 348 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 CARTPTQ16568 116 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 HFEQ30201 348 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 GFOD2Q3B7J2 385 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 ALKBH6Q3KRA9 238 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 OR2T2Q6IF00 324 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 PRSS45Q7RTY3 260 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 THAP5Q7Z6K1 395 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 PEG10Q86TG7 708 aaKnown RBP7.79□□□□□ -1.16
NUP54-207ENST00000508583 NAA40Q86UY6 237 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 ZNF525Q8N782 197 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 CELF2-AS1Q8N7Q2 184 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 BHLHE23Q8NDY6 225 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 WFDC11Q8NEX6 87 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 TFAP2CQ92754 450 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 ERGIC1Q969X5 290 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 TIMD4Q96H15 378 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 TBX5Q99593 518 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 SLC30A2Q9BRI3 323 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 RASSF4Q9H2L5 321 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 POFUT1Q9H488 388 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 Q9H521 79 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 BRD7Q9NPI1 651 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 GNG8Q9UK08 70 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 GTF2A1LQ9UNN4 478 aa7.79□□□□□ -1.16
NUP54-207ENST00000508583 MAP1AP78559 2803 aaPredicted RBP7.78□□□□□ -1.16
NUP54-207ENST00000508583 IGHV1-69-2A0A0G2JMI3 117 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 hCG_38984A0A1B0GV85 526 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 EFCAB10A6NFE3 127 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 LRRC30A6NM36 301 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 ANXA2P2A6NMY6 339 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 DHRS7CA6NNS2 312 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 CLDN25C9JDP6 229 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 J3QRE1 110 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 NDUFS7O75251 213 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 APOL3O95236 402 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 UBCP0CG48 685 aaKnown RBP7.78□□□□□ -1.16
NUP54-207ENST00000508583 CD99P14209 185 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 GIFP27352 417 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 VHLP40337 213 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 MAGEB1P43366 347 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 MAP2K3P46734 347 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 AQP4P55087 323 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 OR8G1Q15617 311 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 OR8B8Q15620 311 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 TSTQ16762 297 aaKnown RBP7.78□□□□□ -1.16
NUP54-207ENST00000508583 CDONQ4KMG0 1287 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 ZBTB37Q5TC79 503 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 LIPNQ5VXI9 398 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 IZUMO2Q6UXV1 221 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 TMPRSS11AQ6ZMR5 421 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 DNM1P46Q6ZS02 220 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 KRTAP1-3Q8IUG1 177 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 OR5AS1Q8N127 324 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 ZCCHC24Q8N2G6 241 aaKnown RBP7.78□□□□□ -1.16
NUP54-207ENST00000508583 SYS1Q8N2H4 156 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 PLPP7Q8NBV4 271 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 OR8B12Q8NGG6 310 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 OR56B2PQ8NGI1 322 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 OR2AE1Q8NHA4 323 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 CNIH3Q8TBE1 160 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 C10orf105Q8TEF2 133 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 APH1BQ8WW43 257 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 HPS1Q92902 700 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 KCTD12Q96CX2 325 aaKnown RBP7.78□□□□□ -1.16
NUP54-207ENST00000508583 LGALS12Q96DT0 336 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 ADAT1Q9BUB4 502 aaKnown RBP7.78□□□□□ -1.16
NUP54-207ENST00000508583 ALG8Q9BVK2 526 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 JAM3Q9BX67 310 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 PBOV1Q9GZY1 135 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 MSL2Q9HCI7 577 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 C14orf119Q9NWQ9 140 aa7.78□□□□□ -1.16
NUP54-207ENST00000508583 CNOT2Q9NZN8 540 aaKnown RBP7.78□□□□□ -1.16
NUP54-207ENST00000508583 MRM2Q9UI43 246 aaKnown RBP7.78□□□□□ -1.16
NUP54-207ENST00000508583 OR52A1Q9UKL2 312 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms