RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 DPY19L2P2Q6ZN68 376 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 DNM1P46Q6ZS02 220 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 FAM122BQ7Z309 247 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 NUP37Q8NFH4 326 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 OR9Q2Q8NGE9 314 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 OR4K13Q8NH42 304 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 GNPDA2Q8TDQ7 276 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 C10orf105Q8TEF2 133 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 C11orf40Q8WZ69 217 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 SLC7A6Q92536 515 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 CCDC124Q96CT7 223 aaKnown RBP3.86□□□□□ -1.79
NUP54-206ENST00000508465 ZNF570Q96NI8 536 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 ALG12Q9BV10 488 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 IFT27Q9BW83 186 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 ZNF416Q9BWM5 594 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 OR2H1Q9GZK4 316 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 NUAK2Q9H093 628 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 RAB1BQ9H0U4 201 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 KCNN2Q9H2S1 579 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 FN3KQ9H479 309 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 ANKRD19PQ9H560 264 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 EGLN3Q9H6Z9 239 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 SMURF2Q9HAU4 748 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 SEPSECSQ9HD40 501 aaKnown RBP3.86□□□□□ -1.79
NUP54-206ENST00000508465 DYNLRB1Q9NP97 96 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 HEYLQ9NQ87 328 aaPredicted RBP3.86□□□□□ -1.79
NUP54-206ENST00000508465 POLE4Q9NR33 117 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 YAE1D1Q9NRH1 226 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 DECR2Q9NUI1 292 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 TREM2Q9NZC2 230 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 TAAR3PQ9P1P4 343 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 ACTR3BQ9P1U1 418 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 SIGLEC7Q9Y286 467 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 TMEM5Q9Y2B1 443 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 TIMM10BQ9Y5J6 103 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 U3KQV3 271 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 MXRA5Q9NR99 2828 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 TLN2Q9Y4G6 2542 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 ARFGEF3Q5TH69 2177 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 IGHV4-61A0A0C4DH41 118 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 A0A1W2PPW3 197 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 LRP5LA4QPB2 252 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 OR6C68A6NDL8 312 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 NPIPB13A6NJU9 1138 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 C12orf71A8MTZ7 269 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 CENPBD1B2RD01 187 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 NPIPB4C9JG80 1138 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 WNT9BO14905 357 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 GYG2O15488 501 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 SYNGR3O43761 229 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 KHDRBS3O75525 346 aaKnown RBP3.85□□□□□ -1.79
NUP54-206ENST00000508465 CST2P09228 141 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 HIST1H1CP16403 213 aaKnown RBP3.85□□□□□ -1.79
NUP54-206ENST00000508465 MSR1P21757 451 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 USF1P22415 310 aaPredicted RBP3.85□□□□□ -1.79
NUP54-206ENST00000508465 PRKACGP22612 351 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 CALB2P22676 271 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 PAX7P23759 505 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 PYCR1P32322 319 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 APLNRP35414 380 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 GLRXP35754 106 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 MPV17P39210 176 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 MAGEB1P43366 347 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 GSSP48637 474 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 PDLIM4P50479 330 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 DSCR9P59020 149 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 CCL8P80075 99 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 CFHR3Q02985 330 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 TAF11Q15544 211 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 TSTQ16762 297 aaKnown RBP3.85□□□□□ -1.79
NUP54-206ENST00000508465 PLA1AQ53H76 456 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 TMEM255AQ5JRV8 349 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 GPR139Q6DWJ6 353 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 ZNF770Q6IQ21 691 aaPredicted RBP3.85□□□□□ -1.79
NUP54-206ENST00000508465 C1orf94Q6P1W5 598 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 LEG1Q6P5S2 330 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 FOXL2NBQ6ZUU3 175 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 ZNF771Q7L3S4 317 aaPredicted RBP3.85□□□□□ -1.79
NUP54-206ENST00000508465 TRPM8Q7Z2W7 1104 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 HDDC2Q7Z4H3 204 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 TMEM179BQ7Z7N9 219 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 NAA40Q86UY6 237 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 SPATA24Q86W54 205 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 ZNF101Q8IZC7 436 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 OR6V1Q8N148 313 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 CYB561A3Q8NBI2 242 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 AQP11Q8NBQ7 271 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 OR52E2Q8NGJ4 325 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 OR51L1Q8NGJ5 315 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 OR4C15Q8NGM1 316 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 OR8D4Q8NGM9 314 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 OR1J2Q8NGS2 313 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 OR1J1Q8NGS3 322 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 SYNPRQ8TBG9 265 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 FANK1Q8TC84 345 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 ZNRF4Q8WWF5 429 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 MRPL24Q96A35 216 aaKnown RBP3.85□□□□□ -1.79
NUP54-206ENST00000508465 POM121L2Q96KW2 1035 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 NMNAT3Q96T66 252 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 BTBD10Q9BSF8 475 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms