RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 CA6P23280 308 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 GSTT1P30711 240 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 OPRL1P41146 370 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 GRB2P62993 217 aaKnown RBP7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 CDK5Q00535 292 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 ZNF154Q13106 437 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 FLOT2Q14254 428 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 GINS1Q14691 196 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 MPPED2Q15777 294 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 ZNF404Q494X3 552 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 ESCO2Q56NI9 601 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 FAM201AQ5SY85 155 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 PRAMEF6Q5VXH4 476 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 DPY19L4Q7Z388 723 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 KLBQ86Z14 1044 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 C1orf87Q8N0U7 546 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 OR56B2PQ8NGI1 322 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 OR6N2Q8NGY6 317 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 ZNF418Q8TF45 676 aaPredicted RBP7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 SPRYD4Q8WW59 207 aaPredicted RBP7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 AMELYQ99218 206 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 TMEM246Q9BRR3 403 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 ABHD6Q9BV23 337 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 TOR3AQ9H497 397 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 NTN4Q9HB63 628 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 CENPMQ9NSP4 180 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 MRPL15Q9P015 296 aaKnown RBP7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 DNAJB9Q9UBS3 223 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 MIOXQ9UGB7 285 aa7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 NOP16Q9Y3C1 178 aaKnown RBP7.59□□□□□ -1.19
PDLIM5-209ENST00000506632 TENM1Q9UKZ4 2725 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 DOCK11Q5JSL3 2073 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 LRRC30A6NM36 301 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 GNGT2O14610 69 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 ANXA8P13928 327 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 PRKACGP22612 351 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 SLC2A5P22732 501 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 DDOSTP39656 456 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 SLC15A1P46059 708 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 CBX1P83916 185 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 FAM3AP98173 230 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 PAX8Q06710 450 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 EIF2B1Q14232 305 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 OR8G1Q15617 311 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 KLF17Q5JT82 389 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 ZNF841Q6ZN19 808 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 SHFQ7M4L6 423 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 SPATA24Q86W54 205 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 ERI1Q8IV48 349 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 OR11L1Q8NGX0 322 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 OTOSQ8NHW6 89 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 NEIL1Q96FI4 390 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 SLC6A7Q99884 636 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 ADAT1Q9BUB4 502 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 SSBP3Q9BWW4 388 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 SUCNR1Q9BXA5 334 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 CADM1Q9BY67 442 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 YY1AP1Q9H869 796 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 SLC25A19Q9HC21 320 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 UFSP2Q9NUQ7 469 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 ZNF319Q9P2F9 582 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 PPIAL4AQ9Y536 164 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 AUP1Q9Y679 476 aa7.58□□□□□ -1.2
PDLIM5-209ENST00000506632 IGHV2-70DA0A0C4DH43 119 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 hCG_38984A0A1B0GV85 526 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 GGT3PA6NGU5 568 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 PRR23D1E9PI22 279 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 TNFRSF13BO14836 293 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 GSC2O15499 205 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 PRODHO43272 600 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 E2F6O75461 281 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 RGS9O75916 674 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 APOC1P02654 83 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 HMGN1P05114 100 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 PRR23D2P0DMB1 279 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 PPIAL4GP0DN37 164 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 RPS2P15880 293 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 PAICSP22234 425 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 POU1F1P28069 291 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 CD80P33681 288 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 PSMB10P40306 273 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 CX3CR1P49238 355 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 ZNF121P58317 390 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 HOXA4Q00056 320 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 BNIP1Q12981 228 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 TAF13Q15543 124 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 KLHL12Q53G59 568 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 SLC35D3Q5M8T2 416 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 PLBD1Q6P4A8 553 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 FAHD1Q6P587 224 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 DCDC5Q6ZRR9 648 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 SPATC1Q76KD6 591 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 SLC16A9Q7RTY1 509 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 CPOQ8IVL8 374 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 PARP8Q8N3A8 854 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 ZDHHC22Q8N966 263 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 SPERTQ8NA61 448 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 OR52H1Q8NGJ2 320 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 FAM216AQ8WUB2 273 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms