RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 TMEM33P57088 247 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 AVPI1Q5T686 147 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 FAM166AQ6J272 317 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 KCTD18Q6PI47 426 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-209ENST00000506630 ZBTB49Q6ZSB9 765 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 RHOUQ7L0Q8 258 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 SLC35F2Q8IXU6 374 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 OR51G2Q8NGK0 314 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 OR8J1Q8NGP2 316 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 OR13G1Q8NGZ3 307 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 CCL17Q92583 94 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 OR2V2Q96R30 315 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 SLC30A2Q9BRI3 323 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 OPA3Q9H6K4 179 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 ADGRL4Q9HBW9 690 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 TMEM100Q9NV29 134 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 IL19Q9UHD0 177 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 TMEM14AQ9Y6G1 99 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 WNK2Q9Y3S1 2297 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 LOC100289279A0A1B0GTE1 492 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 HLA-DPB1P04440 258 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 HTR1FP30939 366 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 IL2RGP31785 369 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 PSMA6P60900 246 aaKnown RBP11.09□□□□□ -0.63
TCOF1-209ENST00000506630 MVKQ03426 396 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 SLC3A1Q07837 685 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 HNRNPA0Q13151 305 aaKnown RBP11.09□□□□□ -0.63
TCOF1-209ENST00000506630 RCN1Q15293 331 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 FAM120AOSQ5T036 256 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 IL17RELQ6ZVW7 336 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 RFLNBQ8N5W9 214 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 OR52H1Q8NGJ2 320 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 CLDND2Q8NHS1 167 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 TIMD4Q96H15 378 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 REEP6Q96HR9 211 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 HRASLS5Q96KN8 279 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 MBOAT4Q96T53 435 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 SLC29A1Q99808 456 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 MROQ9BYG7 248 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 OR10A2Q9H208 303 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 NIPAL2Q9H841 368 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 WARS2Q9UGM6 360 aaKnown RBP11.09□□□□□ -0.63
TCOF1-209ENST00000506630 IKZF2Q9UKS7 526 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 GMPPBQ9Y5P6 360 aa11.09□□□□□ -0.63
TCOF1-209ENST00000506630 ARHGAP32A7KAX9 2087 aa11.08□□□□□ -0.63
TCOF1-209ENST00000506630 ISPDA4D126 451 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 CD300LBA8K4G0 201 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 ZNF670-ZNF695F2Z2N8 137 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 F5H5P2 479 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 PHYHO14832 338 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 WNT9BO14905 357 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 APOL3O95236 402 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 SBK2P0C263 348 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 SRP9P49458 86 aaKnown RBP11.08□□□□□ -0.64
TCOF1-209ENST00000506630 CXCR4P61073 352 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 OR8G1Q15617 311 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 PRSS45Q7RTY3 260 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 OR56B2PQ8NGI1 322 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 ASB17Q8WXJ9 295 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 RAB1CQ92928 201 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 DVL3Q92997 716 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-209ENST00000506630 MEGF10Q96KG7 1140 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 OR8B4Q96RC9 309 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 TBX5Q99593 518 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 SOX7Q9BT81 388 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 ADAT1Q9BUB4 502 aaKnown RBP11.08□□□□□ -0.64
TCOF1-209ENST00000506630 TMEM106BQ9NUM4 274 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 CLN6Q9NWW5 311 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 DCAF16Q9NXF7 216 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 HAO2Q9NYQ3 351 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 PPP1R3CQ9UQK1 317 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 WIPI2Q9Y4P8 454 aa11.08□□□□□ -0.64
TCOF1-209ENST00000506630 IGHV3-64DA0A0J9YX35 117 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 hCG_38984A0A1B0GV85 526 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 ERICH4A6NGS2 130 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 PRR32B1ATL7 298 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 WIPF1O43516 503 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 CA6P23280 308 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 ATP6V1E1P36543 226 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 RBMXP38159 391 aaKnown RBP11.07□□□□□ -0.64
TCOF1-209ENST00000506630 RIDAP52758 137 aaKnown RBP11.07□□□□□ -0.64
TCOF1-209ENST00000506630 FAM3AP98173 230 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 ZNF829Q3KNS6 432 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-209ENST00000506630 DEGS2Q6QHC5 323 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 ZNF322Q6U7Q0 402 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-209ENST00000506630 PEG10Q86TG7 708 aaKnown RBP11.07□□□□□ -0.64
TCOF1-209ENST00000506630 ZNF679Q8IYX0 411 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 OR10H4Q8NGA5 316 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 OR8B12Q8NGG6 310 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 ZNF420Q8TAQ5 688 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-209ENST00000506630 TRUB1Q8WWH5 349 aaKnown RBP11.07□□□□□ -0.64
TCOF1-209ENST00000506630 HPS1Q92902 700 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 RFKQ969G6 155 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 UBE2FQ969M7 185 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 SPSB4Q96A44 273 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 SGK3Q96BR1 496 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 MSI2Q96DH6 328 aaKnown RBP11.07□□□□□ -0.64
TCOF1-209ENST00000506630 MNTQ99583 582 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 SLC22A4Q9H015 551 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 MRPL15Q9P015 296 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms