RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 OR2T7P0C7T2 308 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 SLC2A1P11166 492 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 PSKH1P11801 424 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 TNFRSF1AP19438 455 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 USF1P22415 310 aaPredicted RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 CFL1P23528 166 aaKnown RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 GIFP27352 417 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 DCTDP32321 178 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 DDOSTP39656 456 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 ZNF121P58317 390 aaPredicted RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 SNRPGP62308 76 aaKnown RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 TNFAIP6P98066 277 aaPredicted RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 SLC3A1Q07837 685 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 LOXL1Q08397 574 aaPredicted RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 RCN1Q15293 331 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 TRIP10Q15642 601 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 TIGD6Q17RP2 521 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 HFEQ30201 348 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 SNAI3Q3KNW1 292 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 SLC25A30Q5SVS4 291 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 CLEC9AQ6UXN8 241 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 BCDIN3DQ7Z5W3 292 aaKnown RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 PEG10Q86TG7 708 aaKnown RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 SLC35F2Q8IXU6 374 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 ZNF679Q8IYX0 411 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 OR5AS1Q8N127 324 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 GALNT4Q8N4A0 578 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 PACRGLQ8N7B6 248 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 OR51G2Q8NGK0 314 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 OR2T27Q8NH04 317 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 SPRYD4Q8WW59 207 aaPredicted RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 ELMOD3Q96FG2 381 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 PGAM5Q96HS1 289 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 AMELYQ99218 206 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 MYCBPQ99417 103 aaPredicted RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 APOL4Q9BPW4 351 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 SLC22A4Q9H015 551 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 OR10A2Q9H208 303 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 FAM118AQ9NWS6 357 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 CLN6Q9NWW5 311 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 SMPD3Q9NY59 655 aaPredicted RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 DNAJC27Q9NZQ0 273 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 IL19Q9UHD0 177 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 PRRC2AP48634 2157 aaKnown RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 CADP27708 2225 aa6.18□□□□□ -1.42
GYPB-206ENST00000506516 ZNF469Q96JG9 3925 aaPredicted RBP6.18□□□□□ -1.42
GYPB-206ENST00000506516 TMEM269A0A1B0GVZ9 245 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 ZSCAN5BA6NJL1 495 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 CD300LBA8K4G0 201 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 VWC2LB2RUY7 222 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 LYNX1G3V0Z9 82 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 SLC16A6O15403 523 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 PPIHO43447 177 aaKnown RBP6.17□□□□□ -1.42
GYPB-206ENST00000506516 GMDSO60547 372 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 CDC14BO60729 498 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 ENTPD6O75354 484 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 HEXAP06865 529 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 CD55P08174 381 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 LYNX1P0DP58 116 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 GPR6P46095 362 aaPredicted RBP6.17□□□□□ -1.42
GYPB-206ENST00000506516 MTNR1AP48039 350 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 SRP9P49458 86 aaKnown RBP6.17□□□□□ -1.42
GYPB-206ENST00000506516 CHN2P52757 468 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 RIDAP52758 137 aaKnown RBP6.17□□□□□ -1.42
GYPB-206ENST00000506516 ROM1Q03395 351 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 ZNF92Q03936 586 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 EGR3Q06889 387 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 MZT1Q08AG7 82 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 RIN1Q13671 783 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 SNCBQ16143 134 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 LRRC36Q1X8D7 754 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 TMEM255AQ5JRV8 349 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 GLYATL3Q5SZD4 288 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 TTC23Q5W5X9 447 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 LPCAT4Q643R3 524 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 LRRN1Q6UXK5 716 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 FAM57BQ71RH2 274 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 MAPK1IP1LQ8NDC0 245 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 BHLHE23Q8NDY6 225 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 CCL17Q92583 94 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 GTF3AQ92664 365 aaKnown RBP6.17□□□□□ -1.42
GYPB-206ENST00000506516 RAB1CQ92928 201 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 UBE2FQ969M7 185 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 ITFG2Q969R8 447 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 SGK3Q96BR1 496 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 TIMD4Q96H15 378 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 OR8B4Q96RC9 309 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 MBOAT4Q96T53 435 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 SLC30A2Q9BRI3 323 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 BPESC1Q9GZL8 116 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 VCXQ9H320 206 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 RGCCQ9H4X1 137 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 ADGRL4Q9HBW9 690 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 ZNF391Q9UJN7 358 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 IKZF2Q9UKS7 526 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 LRP12Q9Y561 859 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 PCDHGB1Q9Y5G3 927 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 MYO9AB2RTY4 2548 aa6.17□□□□□ -1.42
GYPB-206ENST00000506516 ROS1P08922 2347 aa6.16□□□□□ -1.42
GYPB-206ENST00000506516 CCDC168Q8NDH2 2452 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms