RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 C22orf15Q8WYQ4 148 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 CCDC124Q96CT7 223 aaKnown RBP4.07□□□□□ -1.76
CDH9-203ENST00000505045 SLC7A6OSQ96CW6 309 aaPredicted RBP4.07□□□□□ -1.76
CDH9-203ENST00000505045 CMBLQ96DG6 245 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 FAHD2AQ96GK7 314 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 OR2V2Q96R30 315 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 GPHA2Q96T91 129 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 DDOQ99489 341 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 GAL3ST1Q99999 423 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 IFT27Q9BW83 186 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 NSRP1Q9H0G5 558 aaKnown RBP4.07□□□□□ -1.76
CDH9-203ENST00000505045 ESM1Q9NQ30 184 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 MMP26Q9NRE1 261 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 DECR2Q9NUI1 292 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 TBCCD1Q9NVR7 557 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 EIF3KQ9UBQ5 218 aaKnown RBP4.07□□□□□ -1.76
CDH9-203ENST00000505045 OPN4Q9UHM6 478 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 B9D1Q9UPM9 204 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 AURKCQ9UQB9 309 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 POLR1DQ9Y2S0 133 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 ARL2BPQ9Y2Y0 163 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 FAM32AQ9Y421 112 aaKnown RBP4.07□□□□□ -1.76
CDH9-203ENST00000505045 U3KQV3 271 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 TVP23AA6NH52 213 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 F5H5P2 479 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 H3BSA7 217 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 ARPC3O15145 178 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 ACSM4P0C7M7 580 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 SLC2A1P11166 492 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 SLC6A6P31641 620 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 CENPAP49450 140 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 RPS6KA3P51812 740 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 LSM6P62312 80 aaKnown RBP4.07□□□□□ -1.76
CDH9-203ENST00000505045 MXRA7P84157 204 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.07□□□□□ -1.76
CDH9-203ENST00000505045 TSPAN31Q12999 210 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 CRMP1Q14194 572 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 ZBTB46Q86UZ6 589 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 JAZF1Q86VZ6 243 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 IQCF1Q8N6M8 205 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 ZNF283Q8N7M2 679 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 AQP11Q8NBQ7 271 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 C19orf18Q8NEA5 215 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 DEFB108BQ8NET1 73 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 OR52E2Q8NGJ4 325 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 OR2AE1Q8NHA4 323 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 TAF15Q92804 592 aaKnown RBP eCLIP4.07□□□□□ -1.76
CDH9-203ENST00000505045 DCLRE1CQ96SD1 692 aaKnown RBP4.07□□□□□ -1.76
CDH9-203ENST00000505045 SLC6A7Q99884 636 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 HCAR1Q9BXC0 346 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 ELOVL3Q9HB03 270 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 TMEM106BQ9NUM4 274 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 ARMC1Q9NVT9 282 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 CYB5R1Q9UHQ9 305 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 SOX21Q9Y651 276 aaPredicted RBP4.07□□□□□ -1.76
CDH9-203ENST00000505045 CDH10Q9Y6N8 788 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 COMMD3-BMI1R4GMX3 469 aa4.07□□□□□ -1.76
CDH9-203ENST00000505045 FAM183AA6NL82 134 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 CEACAM18A8MTB9 384 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 TRAPPC2LH3BP13 241 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 TCF21O43680 179 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 AHCYL1O43865 530 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 FCN3O75636 299 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 CYB5R3P00387 301 aaPredicted RBP4.06□□□□□ -1.76
CDH9-203ENST00000505045 GASTP01350 101 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 MT-ND5P03915 603 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 RPSAP08865 295 aaKnown RBP4.06□□□□□ -1.76
CDH9-203ENST00000505045 GSTM3P21266 225 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 PMELP40967 661 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 GUCA1AP43080 201 aaPredicted RBP4.06□□□□□ -1.76
CDH9-203ENST00000505045 ARHGDIAP52565 204 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 BTG1P62324 171 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 TRAP1Q12931 704 aaKnown RBP4.06□□□□□ -1.76
CDH9-203ENST00000505045 MAB21L1Q13394 359 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 GK2Q14410 553 aaPredicted RBP4.06□□□□□ -1.76
CDH9-203ENST00000505045 KRT72Q14CN4 511 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 KLF17Q5JT82 389 aaPredicted RBP4.06□□□□□ -1.76
CDH9-203ENST00000505045 LCN8Q6JVE9 175 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 ACSM5Q6NUN0 579 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 SHQ1Q6PI26 577 aaKnown RBP4.06□□□□□ -1.76
CDH9-203ENST00000505045 C16orf89Q6UX73 402 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 FBXW12Q6X9E4 464 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 COLCA1Q6ZS62 124 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 TMEM179BQ7Z7N9 219 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 HS3ST5Q8IZT8 346 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 RFLNBQ8N5W9 214 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 SLC37A3Q8NCC5 494 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 HAVCR1Q96D42 359 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 AMELYQ99218 206 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 COQ7Q99807 217 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 ATF6BQ99941 703 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 NIPSNAP1Q9BPW8 284 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 RBM4Q9BWF3 364 aaKnown RBP4.06□□□□□ -1.76
CDH9-203ENST00000505045 C1QTNF5Q9BXJ0 243 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 HDHD2Q9H0R4 259 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 PPP1R3EQ9H7J1 279 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 MED20Q9H944 212 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 AURKAIP1Q9NWT8 199 aaPredicted RBP4.06□□□□□ -1.76
CDH9-203ENST00000505045 ACTR3BQ9P1U1 418 aa4.06□□□□□ -1.76
CDH9-203ENST00000505045 ATPIF1Q9UII2 106 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms