RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 GRPP07492 148 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 RPS2P15880 293 aaKnown RBP11.98□□□□□ -0.49
HOXC9-202ENST00000504557 ZFP36P26651 326 aaKnown RBP11.98□□□□□ -0.49
HOXC9-202ENST00000504557 MDH2P40926 338 aaKnown RBP11.98□□□□□ -0.49
HOXC9-202ENST00000504557 PMELP40967 661 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 MAB21L1Q13394 359 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 MPPED2Q15777 294 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 FAHD1Q6P587 224 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 LRRN1Q6UXK5 716 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 CCDC121Q6ZUS5 278 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 BCDIN3DQ7Z5W3 292 aaKnown RBP11.98□□□□□ -0.49
HOXC9-202ENST00000504557 DEFB108BQ8NET1 73 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 OR11L1Q8NGX0 322 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 RNF133Q8WVZ7 376 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 TMEM158Q8WZ71 300 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 NRBF2Q96F24 287 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 REEP6Q96HR9 211 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 REPIN1Q9BWE0 567 aaKnown RBP11.98□□□□□ -0.49
HOXC9-202ENST00000504557 MMADHCQ9H3L0 296 aaPredicted RBP11.98□□□□□ -0.49
HOXC9-202ENST00000504557 MARCH7Q9H992 704 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 G6PC2Q9NQR9 355 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 LAMP5Q9UJQ1 280 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 COL6A5A8TX70 2615 aa11.98□□□□□ -0.49
HOXC9-202ENST00000504557 SAC3D1A6NKF1 404 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 ANKRD30BLA7E2S9 258 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 CEACAM18A8MTB9 384 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 PRKYO43930 277 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 TMEM155Q4W5P6 130 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 SLC16A9Q7RTY1 509 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 KRT77Q7Z794 578 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 LRRC28Q86X40 367 aaPredicted RBP11.97□□□□□ -0.49
HOXC9-202ENST00000504557 ZDHHC13Q8IUH4 622 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 PHC2Q8IXK0 858 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 C1orf87Q8N0U7 546 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 MUC20Q8N307 709 aaPredicted RBP11.97□□□□□ -0.49
HOXC9-202ENST00000504557 OR8S1Q8NH09 359 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 OTOSQ8NHW6 89 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 PYDC1Q8WXC3 89 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 DNAJC9Q8WXX5 260 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 SGK3Q96BR1 496 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 OR10A2Q9H208 303 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 TOR3AQ9H497 397 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 C7orf69Q9H7B7 122 aa11.97□□□□□ -0.49
HOXC9-202ENST00000504557 PATZ1Q9HBE1 687 aaKnown RBP11.97□□□□□ -0.49
HOXC9-202ENST00000504557 PPIAL4EA0A075B759 164 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 hCG_1807616A0A1W2PRN6 198 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 PPIAL4DF5H284 164 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 FOXH1O75593 365 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 PPIAL4FP0DN26 164 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 SLC2A5P22732 501 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 EPHA2P29317 976 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 CD80P33681 288 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 OPRL1P41146 370 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 CD200P41217 278 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 KRTAP24-1Q3LI83 254 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 ESCO2Q56NI9 601 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 SLC35D3Q5M8T2 416 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 LCN1P1Q5VSP4 162 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 SFRP4Q6FHJ7 346 aaPredicted RBP11.96□□□□□ -0.49
HOXC9-202ENST00000504557 C1orf229Q6ZS94 237 aaPredicted RBP11.96□□□□□ -0.49
HOXC9-202ENST00000504557 ZNF826PQ6ZT77 177 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 TCEANCQ8N8B7 351 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 IL4I1Q96RQ9 567 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 TMPRSS13Q9BYE2 586 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 PRRG3Q9BZD7 231 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 RIBC2Q9H4K1 309 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 PPP1R3EQ9H7J1 279 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 FN3KRPQ9HA64 309 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 MMP26Q9NRE1 261 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 C1orf123Q9NWV4 160 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 H2AFY2Q9P0M6 372 aaPredicted RBP11.96□□□□□ -0.49
HOXC9-202ENST00000504557 ZNF319Q9P2F9 582 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 PPIAL4AQ9Y536 164 aa11.96□□□□□ -0.49
HOXC9-202ENST00000504557 MXRA5Q9NR99 2828 aa11.96□□□□□ -0.5
HOXC9-202ENST00000504557 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.95□□□□□ -0.5
HOXC9-202ENST00000504557 CCDC182A6NF36 153 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 C3orf80F5H4A9 247 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 IFNL4K9M1U5 179 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 TCF21O43680 179 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 GMDSO60547 372 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 APOC1P02654 83 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 FCGR1AP12314 374 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 ESRRGP62508 458 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 FAM3AP98173 230 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 OR8B8Q15620 311 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 COMMD2Q86X83 199 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 PARP8Q8N3A8 854 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 ZNF454Q8N9F8 522 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 C22orf15Q8WYQ4 148 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 TEAD3Q99594 435 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 CIB1Q99828 191 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 TMEM246Q9BRR3 403 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 PAPOLGQ9BWT3 736 aaKnown RBP11.95□□□□□ -0.5
HOXC9-202ENST00000504557 SLC22A4Q9H015 551 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 OPA3Q9H6K4 179 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 SP140LQ9H930 580 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 TMEM165Q9HC07 324 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 MRPL15Q9P015 296 aaKnown RBP11.95□□□□□ -0.5
HOXC9-202ENST00000504557 OR5V1Q9UGF6 321 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 IKZF2Q9UKS7 526 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms