RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 FBXW9Q5XUX1 488 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 AWAT2Q6E213 333 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 PRICKLE2Q7Z3G6 844 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 OR51T1Q8NGJ9 327 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 SOCS4Q8WXH5 440 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 MGLLQ99685 303 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 OR5AC2Q9NZP5 309 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 LOC105371242A0A075B767 164 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 PPIAL4CA0A0B4J2A2 164 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF195O14628 629 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 NGFRP08138 427 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 CT45A10P0DMU9 189 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 PPIAL4GP0DN37 164 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 MMP9P14780 707 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 SELEP16581 610 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 SLC35B1P78383 322 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 Q8WTZ3 238 aa5.65□□□□□ -1.51
CLCN3-204ENST00000504131 DNMT3BQ9UBC3 853 aaKnown RBP5.65□□□□□ -1.51
CLCN3-204ENST00000504131 PLEKHB1Q9UF11 243 aaPredicted RBP5.65□□□□□ -1.51
CLCN3-204ENST00000504131 WNT9AO14904 365 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 PTPN7P35236 360 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 OPRD1P41143 372 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 RFX5P48382 616 aaPredicted RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 CRISP1P54107 249 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 IL17AQ16552 155 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 MBLAC2Q68D91 279 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 ZDHHC24Q6UX98 284 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF550Q7Z398 422 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 OR6K2Q8NGY2 324 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 TVP23CQ96ET8 276 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 CLSTN3Q9BQT9 956 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 ADGRL4Q9HBW9 690 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 B3GAT1Q9P2W7 334 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 SLC45A2Q9UMX9 530 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 SSUH2Q9Y2M2 353 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 DISP2A7MBM2 1401 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 H3BQ15 152 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 BMPR1BO00238 502 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 NKX2-8O15522 239 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 CTSVO60911 334 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 RPL7AP62424 266 aaKnown RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 RPL32P62910 135 aaKnown RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 HOXC5Q00444 222 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 OC90Q02509 493 aaPredicted RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 GAGE2BQ13066 116 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 JOSD1Q15040 202 aaPredicted RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 OR8B8Q15620 311 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 ELAVL1Q15717 326 aaKnown RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 GAGE2EQ4V326 116 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 MDGA2Q7Z553 956 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF761Q86XN6 746 aaPredicted RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 OR4M1Q8NGD0 313 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 OR4K5Q8NGD3 323 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 MARCH1Q8TCQ1 289 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 DUSP19Q8WTR2 217 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 GALMQ96C23 342 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 GAGE2DQ9UEU5 116 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 AHDC1Q5TGY3 1603 aaPredicted RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 A0A1W2PPK0 400 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 TMEM233B4DJY2 109 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 PPP6CO00743 305 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 LANCL1O43813 399 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 TDGF1P13385 188 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 RPL12P30050 165 aaKnown RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 AVPR1BP47901 424 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 DVL1P1P54792 670 aaPredicted RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 SHC2P98077 582 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF648Q5T619 568 aaPredicted RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 GDF6Q6KF10 455 aaPredicted RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 RHBDF2Q6PJF5 856 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 LYG2Q86SG7 212 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 PNPLA1Q8N8W4 532 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 OR10P1Q8NGE3 313 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 S100A16Q96FQ6 103 aaKnown RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 CDC42EP3Q9UKI2 254 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 OSGIN2Q9Y236 505 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 CNTNAP5Q8WYK1 1306 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 PRSS51A0A1B0GVH4 220 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 NPIPB15A6NHN6 443 aaPredicted RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 FIGNL2A6NMB9 653 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 MSTNO14793 375 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 LMX1BO60663 402 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF217O75362 1048 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 CT45A6P0DMU7 189 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 CT45A5P0DMU8 189 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 CT45A7P0DMV0 189 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 PNLIPP16233 465 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 HIST1H1CP16403 213 aaKnown RBP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 AVPR1AP37288 418 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 CEACAM6P40199 344 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 NPBWR2P48146 333 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 PPP1CAP62136 330 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 ACVR1Q04771 509 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 SRSF1Q07955 248 aaKnown RBP eCLIP5.64□□□□□ -1.51
CLCN3-204ENST00000504131 HLA-BQ31612 363 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 FAM174BQ3ZCQ3 159 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 CT45A1Q5HYN5 189 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 FAHD1Q6P587 224 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 CERS5Q8N5B7 392 aa5.64□□□□□ -1.51
CLCN3-204ENST00000504131 NPEPL1Q8NDH3 523 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms