RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 EIF2B1Q14232 305 aaKnown RBP10□□□□□ -0.81
MED28-203ENST00000503945 MPPED2Q15777 294 aa10□□□□□ -0.81
MED28-203ENST00000503945 SNAI3Q3KNW1 292 aa10□□□□□ -0.81
MED28-203ENST00000503945 FAM201AQ5SY85 155 aa10□□□□□ -0.81
MED28-203ENST00000503945 GLYATL3Q5SZD4 288 aa10□□□□□ -0.81
MED28-203ENST00000503945 DCDC5Q6ZRR9 648 aa10□□□□□ -0.81
MED28-203ENST00000503945 SPATC1Q76KD6 591 aa10□□□□□ -0.81
MED28-203ENST00000503945 SHFQ7M4L6 423 aa10□□□□□ -0.81
MED28-203ENST00000503945 HIST2H2ABQ8IUE6 130 aaPredicted RBP10□□□□□ -0.81
MED28-203ENST00000503945 BOLLQ8N9W6 283 aaKnown RBP10□□□□□ -0.81
MED28-203ENST00000503945 OR2AE1Q8NHA4 323 aa10□□□□□ -0.81
MED28-203ENST00000503945 CCDC124Q96CT7 223 aaKnown RBP10□□□□□ -0.81
MED28-203ENST00000503945 NIPSNAP1Q9BPW8 284 aa10□□□□□ -0.81
MED28-203ENST00000503945 TEX12Q9BXU0 123 aa10□□□□□ -0.81
MED28-203ENST00000503945 TOR3AQ9H497 397 aa10□□□□□ -0.81
MED28-203ENST00000503945 OPA3Q9H6K4 179 aa10□□□□□ -0.81
MED28-203ENST00000503945 CMC2Q9NRP2 79 aa10□□□□□ -0.81
MED28-203ENST00000503945 C14orf119Q9NWQ9 140 aa10□□□□□ -0.81
MED28-203ENST00000503945 ERVK-18Q9QC07 812 aa10□□□□□ -0.81
MED28-203ENST00000503945 CLN8Q9UBY8 286 aa10□□□□□ -0.81
MED28-203ENST00000503945 COMMD3-BMI1R4GMX3 469 aa10□□□□□ -0.81
MED28-203ENST00000503945 AQP12BA6NM10 295 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 ANKRD30BLA7E2S9 258 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 ZNF878C9JN71 531 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 ACOT8O14734 319 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 GYG2O15488 501 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 TBX1O43435 398 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 XRCC2O43543 280 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 NDUFA2O43678 99 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 FAM20BO75063 409 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 FSHBP01225 129 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 ANXA2P07355 339 aaKnown RBP9.99□□□□□ -0.81
MED28-203ENST00000503945 CLUP10909 449 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 SLC2A1P11166 492 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 GSTT1P30711 240 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 PITPNBP48739 271 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 NPY4RP50391 375 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 OR8B8Q15620 311 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 PRAMEF6Q5VXH4 476 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 CD276Q5ZPR3 534 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 SFRP4Q6FHJ7 346 aaPredicted RBP9.99□□□□□ -0.81
MED28-203ENST00000503945 LYPD4Q6UWN0 246 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 RHOUQ7L0Q8 258 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 DPY19L4Q7Z388 723 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 AQP12AQ8IXF9 295 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 SIGLECL1Q8N7X8 197 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 ZDHHC22Q8N966 263 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 CANT1Q8WVQ1 401 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 SGK3Q96BR1 496 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 ZMYND19Q96E35 227 aaPredicted RBP9.99□□□□□ -0.81
MED28-203ENST00000503945 CLPTM1LQ96KA5 538 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 INTS14Q96SY0 518 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 OR51V1Q9H2C8 321 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 YY1AP1Q9H869 796 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 TRIM36Q9NQ86 728 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 VNN3Q9NY84 501 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 PDP1Q9P0J1 537 aaPredicted RBP9.99□□□□□ -0.81
MED28-203ENST00000503945 ZNF69Q9UC07 566 aa9.99□□□□□ -0.81
MED28-203ENST00000503945 TRAV38-1A0A0B4J264 116 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 IGHV2-70DA0A0C4DH43 119 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 DHRS12A0PJE2 317 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 FAM183AA6NL82 134 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 E2F6O75461 281 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 GLCEO94923 617 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 LIPFP07098 398 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 CFL1P23528 166 aaKnown RBP9.98□□□□□ -0.81
MED28-203ENST00000503945 GRK5P34947 590 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 MTNR1AP48039 350 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 CX3CR1P49238 355 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 BAMBIQ13145 260 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 GINS1Q14691 196 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 TIGD6Q17RP2 521 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 LYPD2Q6UXB3 125 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 ERI1Q8IV48 349 aaKnown RBP9.98□□□□□ -0.81
MED28-203ENST00000503945 BCL6BQ8N143 479 aaPredicted RBP9.98□□□□□ -0.81
MED28-203ENST00000503945 C19orf18Q8NEA5 215 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 OR52H1Q8NGJ2 320 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 OR8S1Q8NH09 359 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 SPSB4Q96A44 273 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 NUDT16L1Q9BRJ7 211 aaKnown RBP9.98□□□□□ -0.81
MED28-203ENST00000503945 ADAT1Q9BUB4 502 aaKnown RBP9.98□□□□□ -0.81
MED28-203ENST00000503945 ABHD6Q9BV23 337 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 MED20Q9H944 212 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 C1orf123Q9NWV4 160 aa9.98□□□□□ -0.81
MED28-203ENST00000503945 PKD1L1Q8TDX9 2849 aa9.97□□□□□ -0.81
MED28-203ENST00000503945 C5orf63A6NC05 138 aa9.97□□□□□ -0.81
MED28-203ENST00000503945 ARRDC5A6NEK1 342 aa9.97□□□□□ -0.81
MED28-203ENST00000503945 A6NLC8 198 aa9.97□□□□□ -0.81
MED28-203ENST00000503945 PRR23D1E9PI22 279 aaPredicted RBP9.97□□□□□ -0.81
MED28-203ENST00000503945 LGALS8O00214 317 aa9.97□□□□□ -0.81
MED28-203ENST00000503945 DYNC1I1O14576 645 aa9.97□□□□□ -0.81
MED28-203ENST00000503945 PHYHO14832 338 aa9.97□□□□□ -0.81
MED28-203ENST00000503945 PTBP3O95758 552 aaKnown RBP9.97□□□□□ -0.81
MED28-203ENST00000503945 H2BFMP0C1H6 154 aa9.97□□□□□ -0.81
MED28-203ENST00000503945 PRR23D2P0DMB1 279 aaPredicted RBP9.97□□□□□ -0.81
MED28-203ENST00000503945 ANXA8P13928 327 aa9.97□□□□□ -0.81
MED28-203ENST00000503945 PRTN3P24158 256 aa9.97□□□□□ -0.81
MED28-203ENST00000503945 PSMB10P40306 273 aa9.97□□□□□ -0.81
MED28-203ENST00000503945 UBA52P62987 128 aaKnown RBP9.97□□□□□ -0.81
MED28-203ENST00000503945 FAM3AP98173 230 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms