RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ARHGAP24Q8N264 748 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 BOLLQ8N9W6 283 aaKnown RBP13.56□□□□□ -0.24
SCLT1-204ENST00000503215 OR2T33Q8NG76 320 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 OR10G2Q8NGC3 310 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 OR6K6Q8NGW6 343 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 RAB40AQ8WXH6 277 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 NEIL1Q96FI4 390 aaPredicted RBP13.56□□□□□ -0.24
SCLT1-204ENST00000503215 AMELYQ99218 206 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 FEVQ99581 238 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 PPP1R3EQ9H7J1 279 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 TAS2R1Q9NYW7 299 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 IGHV2-70DA0A0C4DH43 119 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 DHRS12A0PJE2 317 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 CALB2P22676 271 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 PITPNBP48739 271 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 TAF13Q15543 124 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 DOK3Q7L591 496 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 ADGRG5Q8IZF4 528 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 CELF2-AS1Q8N7Q2 184 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 OR56B2PQ8NGI1 322 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 RAB3IPQ96QF0 476 aaPredicted RBP13.55□□□□□ -0.24
SCLT1-204ENST00000503215 KCNJ15Q99712 375 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 CHID1Q9BWS9 393 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 MUC13Q9H3R2 512 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 ZNF319Q9P2F9 582 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 BAIAP2Q9UQB8 552 aa13.55□□□□□ -0.24
SCLT1-204ENST00000503215 KIR2DS1A0A191URI9 304 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 DNAJC9-AS1A6NH13 148 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 C22orf46C9J442 243 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 FSTL3O95633 263 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 PTBP3O95758 552 aaKnown RBP13.54□□□□□ -0.24
SCLT1-204ENST00000503215 IRF2P14316 349 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 POU4F2Q12837 409 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 AWAT1Q58HT5 328 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 TEX30Q5JUR7 227 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 WDR25Q64LD2 544 aaPredicted RBP13.54□□□□□ -0.24
SCLT1-204ENST00000503215 HS3ST5Q8IZT8 346 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 C1orf87Q8N0U7 546 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 C3orf56Q8N813 242 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 OR8B3Q8NGG8 313 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 OR11L1Q8NGX0 322 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 OR8B2Q96RD0 313 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 THTPAQ9BU02 230 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 ADAT1Q9BUB4 502 aaKnown RBP13.54□□□□□ -0.24
SCLT1-204ENST00000503215 NTN4Q9HB63 628 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 CTSZQ9UBR2 303 aa13.54□□□□□ -0.24
SCLT1-204ENST00000503215 MDFIC2A0A1B0GVS7 189 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 RIIAD1A6NNX1 92 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 C3orf80F5H4A9 247 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 TNFRSF13BO14836 293 aaPredicted RBP13.53□□□□□ -0.24
SCLT1-204ENST00000503215 FCN3O75636 299 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 GRPP07492 148 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 RAP2AP10114 183 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 PSMB10P40306 273 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 EIF2B1Q14232 305 aaKnown RBP13.53□□□□□ -0.24
SCLT1-204ENST00000503215 CD300LDQ6UXZ3 194 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 DCDC5Q6ZRR9 648 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 PRSS45Q7RTY3 260 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 DPY19L4Q7Z388 723 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 ERI1Q8IV48 349 aaKnown RBP13.53□□□□□ -0.24
SCLT1-204ENST00000503215 PARP8Q8N3A8 854 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 GIPC3Q8TF64 312 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 CANT1Q8WVQ1 401 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 ERGIC1Q969X5 290 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 OTULINQ96BN8 352 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 SGK3Q96BR1 496 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 UPRTQ96BW1 309 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 ASB9Q96DX5 294 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 PLEKHA8Q96JA3 519 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 NUDT16L1Q9BRJ7 211 aaKnown RBP13.53□□□□□ -0.24
SCLT1-204ENST00000503215 ABHD6Q9BV23 337 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 FN3KRPQ9HA64 309 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 CMC2Q9NRP2 79 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 RNF7Q9UBF6 113 aa13.53□□□□□ -0.24
SCLT1-204ENST00000503215 PRPF19Q9UMS4 504 aaKnown RBP13.53□□□□□ -0.24
SCLT1-204ENST00000503215 ZNF878C9JN71 531 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 GMDSO60547 372 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 CST1P01037 141 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 IFNGP01579 166 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 EGR1P18146 543 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 POU1F1P28069 291 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 GSTT1P30711 240 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 CX3CR1P49238 355 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 BNIP1Q12981 228 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 BLMHQ13867 455 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 KLHL12Q53G59 568 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 BTNL3Q6UXE8 466 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 LRRN1Q6UXK5 716 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 RBMS3Q6XE24 437 aaKnown RBP13.52□□□□□ -0.25
SCLT1-204ENST00000503215 NLRC3Q7RTR2 1065 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 WDR86Q86TI4 376 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 C11orf53Q8IXP5 236 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 OR6N2Q8NGY6 317 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 SPSB4Q96A44 273 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 LRGUKQ96M69 825 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 MS4A7Q9GZW8 240 aaPredicted RBP13.52□□□□□ -0.25
SCLT1-204ENST00000503215 OR51V1Q9H2C8 321 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 C1orf123Q9NWV4 160 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 DNAJC27Q9NZQ0 273 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 MRPL15Q9P015 296 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms