RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 CDS1Q92903 461 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 CREB3L1Q96BA8 519 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 FLYWCH2Q96CP2 140 aaKnown RBP3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 CMTM5Q96DZ9 223 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 WDR34Q96EX3 536 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 ZNF486Q96H40 463 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 MCEEQ96PE7 176 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 MRPL45Q9BRJ2 306 aaKnown RBP3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 TRIM51Q9BSJ1 452 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 CALN1Q9BXU9 219 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 PPDPFQ9H3Y8 114 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 TMEM38AQ9H6F2 299 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 SP140LQ9H930 580 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 PAK5Q9P286 719 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 SLC2A6Q9UGQ3 507 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 LGALS13Q9UHV8 139 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 KCNG2Q9UJ96 466 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 GNPTGQ9UJJ9 305 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 FAF1Q9UNN5 650 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 DENND4AQ7Z401 1863 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 DOCK8Q8NF50 2099 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 CEP250Q9BV73 2442 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 LAMA1P25391 3075 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 CEP295Q9C0D2 2601 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 IGHV4-61A0A0C4DH41 118 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 TRBV5-4A0A0C4DH59 114 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 A0A1W2PR80 420 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 DNAJC9-AS1A6NH13 148 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 APOC4-APOC2K7ER74 178 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 SULT2B1O00204 365 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 INSIG1O15503 277 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 TNFSF12O43508 249 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 SOX15O60248 233 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 TRAPPC6AO75865 159 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 MPZL1O95297 269 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 UTS2O95399 124 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 TTC4O95801 387 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 IGHV2-5P01817 119 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 IGHV4-59P01825 116 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 APOC2P02655 101 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 C2P06681 752 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 GIMD1P0DJR0 217 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 IGHV4-38-2P0DP08 117 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 LIPCP11150 499 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 IL9P15248 144 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 ZP3P21754 424 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 SLC2A5P22732 501 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 CXCR2P25025 360 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 LMO2P25791 158 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 ADORA2BP29275 332 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 MIPP30301 263 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 MAS1LP35410 378 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 ARR3P36575 388 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 NR4A2P43354 598 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 TSFMP43897 325 aaKnown RBP3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 YAP1P46937 504 aaKnown RBP3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 CSRP3P50461 194 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 NKX2-5P52952 324 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 DVL1P1P54792 670 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 DLX5P56178 289 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 CXCR4P61073 352 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 RAB14P61106 215 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 MAGOHP61326 146 aaKnown RBP3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 DHODHQ02127 395 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 DYNC1I2Q13409 638 aaKnown RBP3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 MED21Q13503 144 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 TAB1Q15750 504 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 PSMD5Q16401 504 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 IMPG1Q17R60 797 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 ECSCRQ19T08 205 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 ACER2Q5QJU3 275 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 CEP85LQ5SZL2 805 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 GPRC6AQ5T6X5 926 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 HHATQ5VTY9 493 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 FAM219BQ5XKK7 198 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 ZNF425Q6IV72 752 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 C12orf54Q6X4T0 127 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 FRRS1Q6ZNA5 592 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 C3orf62Q6ZUJ4 267 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 NCCRP1Q6ZVX7 275 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 COX15Q7KZN9 410 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 BHLHA9Q7RTU4 235 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 CEACAM19Q7Z692 300 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 HIPK1Q86Z02 1210 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 PRR22Q8IZ63 422 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 ZNF557Q8N988 423 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 C12orf29Q8N999 325 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 HSD17B11Q8NBQ5 300 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR5T2Q8NGG2 359 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR6K6Q8NGW6 343 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR56B4Q8NH76 319 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 C11orf45Q8TAV5 145 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 ENKURQ8TC29 256 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 FNDC8Q8TC99 324 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 CXorf40AQ8TE69 158 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 GATAD1Q8WUU5 269 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 TFB1MQ8WVM0 346 aaKnown RBP3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 RNF133Q8WVZ7 376 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 TCTEX1D2Q8WW35 142 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 PSMG2Q969U7 264 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms