RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 SLAMF6Q96DU3 332 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 TECTBQ96PL2 329 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 KCNJ15Q99712 375 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 OPA3Q9H6K4 179 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 ZNF696Q9H7X3 374 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 TRIM36Q9NQ86 728 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 CENPMQ9NSP4 180 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 MRPL15Q9P015 296 aaKnown RBP14.27□□□□□ -0.13
SMC4-226ENST00000497311 ACTR3BQ9P1U1 418 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 COMMD3-BMI1R4GMX3 469 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 MDFIC2A0A1B0GVS7 189 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 POM121CA8CG34 1229 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 C22orf46C9J442 243 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 C3orf80F5H4A9 247 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 SPARCP09486 303 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 PSKH1P11801 424 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 ANOS1P23352 680 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 PRKXP51817 358 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 BPIFB3P59826 476 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 HOXA4Q00056 320 aaPredicted RBP14.26□□□□□ -0.13
SMC4-226ENST00000497311 MZT1Q08AG7 82 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 OR8B8Q15620 311 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 ZNF770Q6IQ21 691 aaPredicted RBP14.26□□□□□ -0.13
SMC4-226ENST00000497311 BRD3OSQ6XYD6 125 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 TRPM8Q7Z2W7 1104 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 ZNF511Q8NB15 262 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 AQP11Q8NBQ7 271 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 ZDHHC16Q969W1 377 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 TSSK6Q9BXA6 273 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 BAIAP2Q9UQB8 552 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 N6AMT1Q9Y5N5 214 aa14.26□□□□□ -0.13
SMC4-226ENST00000497311 TRAV38-1A0A0B4J264 116 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.25□□□□□ -0.13
SMC4-226ENST00000497311 C5orf63A6NC05 138 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 ZNF593O00488 134 aaPredicted RBP14.25□□□□□ -0.13
SMC4-226ENST00000497311 HOXA3O43365 443 aaPredicted RBP14.25□□□□□ -0.13
SMC4-226ENST00000497311 ADAM20O43506 726 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 NDUFA2O43678 99 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 GYPBP06028 91 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 LIPFP07098 398 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 GRPP07492 148 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 MAGEA2P43356 314 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 CRMP1Q14194 572 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 PCK2Q16822 640 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 DEFB112Q30KQ8 113 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 OR2T33Q8NG76 320 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 OR56B2PQ8NGI1 322 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 PCGF1Q9BSM1 259 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 C1orf21Q9H246 121 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 PRDM13Q9H4Q3 707 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 C14orf119Q9NWQ9 140 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 C1orf123Q9NWV4 160 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 KIF17Q9P2E2 1029 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 CTSZQ9UBR2 303 aa14.25□□□□□ -0.13
SMC4-226ENST00000497311 OOEPA6NGQ2 149 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 A6NLC8 198 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 ZNF879B4DU55 563 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 ZNF878C9JN71 531 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 P2RY10O00398 339 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 WIPF1O43516 503 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 XRCC2O43543 280 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 SLC2A1P11166 492 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 SPI1P17947 270 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 ATP6V1B2P21281 511 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 DDOSTP39656 456 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 SLC15A1P46059 708 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 SLC25A1P53007 311 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 PPP1R8Q12972 351 aaKnown RBP14.24□□□□□ -0.13
SMC4-226ENST00000497311 TEX30Q5JUR7 227 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 SPATC1Q76KD6 591 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 OR6K6Q8NGW6 343 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 TAF15Q92804 592 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMC4-226ENST00000497311 TMIGD2Q96BF3 282 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 NMNAT2Q9BZQ4 307 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 MUC13Q9H3R2 512 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 TAS2R1Q9NYW7 299 aa14.24□□□□□ -0.13
SMC4-226ENST00000497311 PRPF19Q9UMS4 504 aaKnown RBP14.24□□□□□ -0.13
SMC4-226ENST00000497311 PKD1L1Q8TDX9 2849 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 hCG_1807616A0A1W2PRN6 198 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 ANKRD30BLA7E2S9 258 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 TNFRSF13BO14836 293 aaPredicted RBP14.23□□□□□ -0.13
SMC4-226ENST00000497311 TBX1O43435 398 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 TOX4O94842 621 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 SOX14O95416 240 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 IFNGP01579 166 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 CLUP10909 449 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 CFHR2P36980 270 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 BLVRAP53004 296 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 GRB2P62993 217 aaKnown RBP14.23□□□□□ -0.13
SMC4-226ENST00000497311 TRIM25Q14258 630 aaKnown RBP14.23□□□□□ -0.13
SMC4-226ENST00000497311 MICAQ29983 383 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 ZNF826PQ6ZT77 177 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 GCSAMQ8N6F7 178 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 PNLDC1Q8NA58 520 aaKnown RBP14.23□□□□□ -0.13
SMC4-226ENST00000497311 OR4Q3Q8NH05 313 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 SPSB4Q96A44 273 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 DGCR6LQ9BY27 220 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 MAGIXQ9H6Y5 334 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 REEP1Q9H902 201 aa14.23□□□□□ -0.13
SMC4-226ENST00000497311 NOX4Q9NPH5 578 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms