RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CYTH2Q99418 400 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 HSD17B10Q99714 261 aaKnown RBP2.68□□□□□ -1.98
VPS36-206ENST00000497149 BPIFA3Q9BQP9 254 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 C11orf70Q9BRQ4 267 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 LRRC19Q9H756 370 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 BEX1Q9HBH7 125 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 TREM1Q9NP99 234 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 AGPAT4Q9NRZ5 378 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 C20orf96Q9NUD7 363 aaPredicted RBP2.68□□□□□ -1.98
VPS36-206ENST00000497149 CLN8Q9UBY8 286 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 PCM1Q15154 2024 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 AHDC1Q5TGY3 1603 aaPredicted RBP2.68□□□□□ -1.98
VPS36-206ENST00000497149 FHOD3Q2V2M9 1422 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 IGLV2-18A0A075B6J9 118 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 TRAV40A0A0B4J280 105 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 A6NDN8 102 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 ATP5HO75947 161 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 RCBTB2O95199 551 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 OR8U9P0C7N5 309 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 CTRB1P17538 263 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 CSNK2A2P19784 350 aaPredicted RBP2.67□□□□□ -1.98
VPS36-206ENST00000497149 HMOX2P30519 316 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 CXCL12P48061 93 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 KLHL40Q2TBA0 621 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 HNRNPA1L2Q32P51 320 aaKnown RBP2.67□□□□□ -1.98
VPS36-206ENST00000497149 TPTE2P1Q5T6R2 138 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 PIP5KL1Q5T9C9 394 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 PTRHD1Q6GMV3 140 aaKnown RBP2.67□□□□□ -1.98
VPS36-206ENST00000497149 TWF2Q6IBS0 349 aaKnown RBP2.67□□□□□ -1.98
VPS36-206ENST00000497149 TMEM53Q6P2H8 277 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 IGFL1Q6UW32 110 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 HMGN2P46Q86SG4 172 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 ARRDC1Q8N5I2 433 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 RNF182Q8N6D2 247 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 CSGALNACT2Q8N6G5 542 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 OR6Q1Q8NGQ2 317 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 ERMNQ8TAM6 284 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 TMIGD2Q96BF3 282 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 ZNF488Q96MN9 340 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 ZNF317Q96PQ6 595 aaPredicted RBP2.67□□□□□ -1.98
VPS36-206ENST00000497149 RNF5Q99942 180 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 LLPHQ9BRT6 129 aaKnown RBP2.67□□□□□ -1.98
VPS36-206ENST00000497149 UCK2Q9BZX2 261 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 CENPHQ9H3R5 247 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 TMEM38AQ9H6F2 299 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 CYP3A43Q9HB55 503 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 PEF1Q9UBV8 284 aaKnown RBP2.67□□□□□ -1.98
VPS36-206ENST00000497149 UBN2Q6ZU65 1347 aa2.67□□□□□ -1.98
VPS36-206ENST00000497149 KCNE1BA0A087WTH5 132 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 TRAV19A0A0A6YYK7 116 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 IGKV1-8A0A0C4DH67 115 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 A0A0J9YXV3 536 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 A0A0J9YYE9 177 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 SUPT3HB4E1H0 165 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 H7C1H1 209 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 RRP8O43159 456 aaKnown RBP2.66□□□□□ -1.98
VPS36-206ENST00000497149 CCNE2O96020 404 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 TRBC1P01850 177 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 HBE1P02100 147 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 CLTAP09496 248 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 OR8G3PP0DMU2 310 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 MSR1P21757 451 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 IL32P24001 234 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 RBM34P42696 430 aaKnown RBP2.66□□□□□ -1.98
VPS36-206ENST00000497149 VBP1P61758 197 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 CDC20Q12834 499 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 DGCR6Q14129 220 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 ZNF266Q14584 549 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 MPV17L2Q567V2 206 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 ZFP1Q6P2D0 407 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 ITPRIPQ8IWB1 547 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 KATNAL2Q8IYT4 538 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 OFCC1Q8IZS5 231 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 SNX31Q8N9S9 440 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 ANGPTL6Q8NI99 470 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 LINC01560Q8TB33 94 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 CIRBP-AS1Q8TBR5 109 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 OR51E1Q8TCB6 317 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 CCDC12Q8WUD4 166 aaPredicted RBP2.66□□□□□ -1.98
VPS36-206ENST00000497149 ASZ1Q8WWH4 475 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 RNF145Q96MT1 663 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 DOK1Q99704 481 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 API5Q9BZZ5 524 aaKnown RBP2.66□□□□□ -1.98
VPS36-206ENST00000497149 BLZF1Q9H2G9 400 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 AUNIPQ9H7T9 357 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 SLC38A10Q9HBR0 1119 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 MRM3Q9HC36 420 aaKnown RBP2.66□□□□□ -1.98
VPS36-206ENST00000497149 CCNB1IP1Q9NPC3 277 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 ACP6Q9NPH0 428 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 MRPL22Q9NWU5 206 aaKnown RBP2.66□□□□□ -1.98
VPS36-206ENST00000497149 BZW2Q9Y6E2 419 aaKnown RBP2.66□□□□□ -1.98
VPS36-206ENST00000497149 EVC2Q86UK5 1308 aa2.66□□□□□ -1.98
VPS36-206ENST00000497149 SERPINE3A8MV23 424 aa2.65□□□□□ -1.99
VPS36-206ENST00000497149 H0YJW9 148 aa2.65□□□□□ -1.99
VPS36-206ENST00000497149 GOLGA6L19H0YKK7 550 aa2.65□□□□□ -1.99
VPS36-206ENST00000497149 TEX46H3BTG2 121 aa2.65□□□□□ -1.99
VPS36-206ENST00000497149 ZNF701M0R085 212 aaPredicted RBP2.65□□□□□ -1.99
VPS36-206ENST00000497149 CBR3O75828 277 aa2.65□□□□□ -1.99
VPS36-206ENST00000497149 MYO1DO94832 1006 aa2.65□□□□□ -1.99
VPS36-206ENST00000497149 TGM6O95932 706 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms