RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 TIGD6Q17RP2 521 aa14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 ZIK1Q3SY52 487 aaPredicted RBP14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 ZNF454Q8N9F8 522 aa14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 C19orf18Q8NEA5 215 aa14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 SPSB4Q96A44 273 aa14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 REEP6Q96HR9 211 aa14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 PGAM5Q96HS1 289 aa14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 CNN2Q99439 309 aaKnown RBP14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 RBM4BQ9BQ04 359 aaKnown RBP14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 PRRG3Q9BZD7 231 aa14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 SHARPINQ9H0F6 387 aa14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 UFSP2Q9NUQ7 469 aa14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 TMEM160Q9NX00 188 aa14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 JMJD1CQ15652 2540 aa14.79□□□□□ -0.04
RHBDD3-207ENST00000496342 hCG_38984A0A1B0GV85 526 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 B4DSR2 109 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 XRCC2O43543 280 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 ALPLP05186 524 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 MSMBP08118 114 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 SRP9P49458 86 aaKnown RBP14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 SEC61A1P61619 476 aaKnown RBP14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 FAM3AP98173 230 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 SLC3A1Q07837 685 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 MPPED2Q15777 294 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 NXNL2Q5VZ03 156 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 ZFP1Q6P2D0 407 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 MEPCEQ7L2J0 689 aaKnown RBP14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 KRT77Q7Z794 578 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 OR8B12Q8NGG6 310 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 UBE2FQ969M7 185 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 BEX2Q9BXY8 128 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 YIPF3Q9GZM5 350 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 ADGRL4Q9HBW9 690 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 S100A14Q9HCY8 104 aa14.78□□□□□ -0.04
RHBDD3-207ENST00000496342 TMEM178BH3BS89 294 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 RAD23AP54725 363 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 DVL1P1P54792 670 aaPredicted RBP14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 PSMA6P60900 246 aaKnown RBP14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 BTG1P62324 171 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 KRTAP21-3Q3LHN1 58 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 PLEKHG7Q6ZR37 379 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 GLCCI1Q86VQ1 547 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 SLC35F2Q8IXU6 374 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 CBR4Q8N4T8 237 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 TMEM186Q96B77 213 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 LYZL4Q96KX0 146 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 TBX5Q99593 518 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 HIF1ANQ9NWT6 349 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 CDC42EP3Q9UKI2 254 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 CUBNO60494 3623 aa14.77□□□□□ -0.05
RHBDD3-207ENST00000496342 PLPP2O43688 288 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 FAM20BO75063 409 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 CD200P41217 278 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 MFGE8Q08431 387 aaPredicted RBP14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 SSX6Q7RTT6 188 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 PEG10Q86TG7 708 aaKnown RBP14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 OR51G2Q8NGK0 314 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 OR51F2Q8NH61 342 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 FAM81AQ8TBF8 368 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 PPP1R14AQ96A00 147 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 RAB39BQ96DA2 213 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 RAB3IPQ96QF0 476 aaPredicted RBP14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 OR8B4Q96RC9 309 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 MBOAT4Q96T53 435 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 OR10A2Q9H208 303 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 USE1Q9NZ43 259 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 H2AFY2Q9P0M6 372 aaPredicted RBP14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 AASSQ9UDR5 926 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 ENOPH1Q9UHY7 261 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 IKZF2Q9UKS7 526 aa14.76□□□□□ -0.05
RHBDD3-207ENST00000496342 SLC22A31A6NKX4 558 aa14.75□□□□□ -0.05
RHBDD3-207ENST00000496342 ACKR3P25106 362 aa14.75□□□□□ -0.05
RHBDD3-207ENST00000496342 GSK3AP49840 483 aa14.75□□□□□ -0.05
RHBDD3-207ENST00000496342 CXCR4P61073 352 aa14.75□□□□□ -0.05
RHBDD3-207ENST00000496342 LCN2P80188 198 aa14.75□□□□□ -0.05
RHBDD3-207ENST00000496342 SRSF2Q01130 221 aaKnown RBP14.75□□□□□ -0.05
RHBDD3-207ENST00000496342 ZNF826PQ6ZT77 177 aa14.75□□□□□ -0.05
RHBDD3-207ENST00000496342 WDR86Q86TI4 376 aa14.75□□□□□ -0.05
RHBDD3-207ENST00000496342 SLC29A1Q99808 456 aa14.75□□□□□ -0.05
RHBDD3-207ENST00000496342 APOL4Q9BPW4 351 aa14.75□□□□□ -0.05
RHBDD3-207ENST00000496342 FAM206AQ9NX38 181 aa14.75□□□□□ -0.05
RHBDD3-207ENST00000496342 MRPL15Q9P015 296 aaKnown RBP14.75□□□□□ -0.05
RHBDD3-207ENST00000496342 ANKRD65E5RJM6 399 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 C3orf80F5H4A9 247 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 APOC1P02654 83 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 FAM157CP0CG43 387 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 SRD5A1P18405 259 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 ZFP36P26651 326 aaKnown RBP14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 GATA4P43694 442 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 ALDH3A2P51648 485 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 RHOUQ7L0Q8 258 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 LRRC28Q86X40 367 aaPredicted RBP14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 GID4Q8IVV7 300 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 PQLC1Q8N2U9 271 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 BOLLQ8N9W6 283 aaKnown RBP14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 OR52H1Q8NGJ2 320 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 EME1Q96AY2 570 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 OPA3Q9H6K4 179 aa14.74□□□□□ -0.05
RHBDD3-207ENST00000496342 LPAR3Q9UBY5 353 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms