RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 CLPTM1LQ96KA5 538 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 ATF6BQ99941 703 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 OCSTAMPQ9BR26 566 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 DNTTIP1Q9H147 329 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 RERGLQ9H628 205 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 C14orf119Q9NWQ9 140 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 POLR1DQ9Y2S0 133 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 IMPA2O14732 288 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 NDUFB3O43676 98 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 NDUFB2O95178 105 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 GRPP07492 148 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 VSIG10L2P0DP72 767 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 KDELR2P33947 212 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 CDKN2AP42771 156 aaKnown RBP10.94□□□□□ -0.66
COL1A1-209ENST00000495677 TPTEP56180 551 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 POU4F2Q12837 409 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 CYLC2Q14093 348 aaPredicted RBP10.94□□□□□ -0.66
COL1A1-209ENST00000495677 NSUN5P1Q3KNT7 163 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 CYBRD1Q53TN4 286 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 WDR38Q5JTN6 314 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 SLC18B1Q6NT16 456 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 DNM1P34Q6PK57 102 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 CORO6Q6QEF8 472 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 PTCHD4Q6ZW05 846 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 AJUBAQ96IF1 538 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 CCL13Q99616 98 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 FNDC11Q9BVV2 318 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 NPFFR1Q9GZQ6 430 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 METTL8Q9H825 291 aaKnown RBP10.94□□□□□ -0.66
COL1A1-209ENST00000495677 PNRC2Q9NPJ4 139 aaKnown RBP10.94□□□□□ -0.66
COL1A1-209ENST00000495677 SERTAD4Q9NUC0 356 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 SIGLEC7Q9Y286 467 aa10.94□□□□□ -0.66
COL1A1-209ENST00000495677 SF3B6Q9Y3B4 125 aaKnown RBP10.94□□□□□ -0.66
COL1A1-209ENST00000495677 IGLV1-36A0A0B4J1U3 117 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.93□□□□□ -0.66
COL1A1-209ENST00000495677 DCTN6O00399 190 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 BHLHE40O14503 412 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 FFAR1O14842 300 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 NPPAP01160 153 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 FAHP16930 419 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 AMY2BP19961 511 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 OTX1P32242 354 aaPredicted RBP10.93□□□□□ -0.66
COL1A1-209ENST00000495677 GRK5P34947 590 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 GGT2P36268 569 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 ZNF92Q03936 586 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 TRAP1Q12931 704 aaKnown RBP10.93□□□□□ -0.66
COL1A1-209ENST00000495677 KLRD1Q13241 179 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 MEP1BQ16820 701 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 PCK2Q16822 640 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 LRRC75BQ2VPJ9 315 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 LRRC10Q5BKY1 277 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 PGBD2Q6P3X8 592 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 CFAP77Q6ZQR2 320 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 LYG1Q8N1E2 194 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 SLC26A10Q8NG04 563 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 OR8J3Q8NGG0 315 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 OR51G2Q8NGK0 314 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 PITX2Q99697 317 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 CDCA4Q9BXL8 241 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 ANKRD19PQ9H560 264 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 CYB5R1Q9UHQ9 305 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 B9D1Q9UPM9 204 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 TMEM5Q9Y2B1 443 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 DSCAML1Q8TD84 2053 aa10.93□□□□□ -0.66
COL1A1-209ENST00000495677 IGHV3OR15-7A0A075B7D8 119 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 LOC100653049A0A140TA62 436 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 A0A1B0GW55 424 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 A0A1W2PRD5 423 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 A0A1W2PRF3 423 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 A0A1W2PRM7 423 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 hCG_1807616A0A1W2PRN6 198 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 GGT3PA6NGU5 568 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 A6NLC8 198 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.92□□□□□ -0.66
COL1A1-209ENST00000495677 KRT34O76011 436 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 DUX4L2P0CJ85 424 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 DUX4L3P0CJ86 424 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 DUX4L4P0CJ87 422 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 DUX4L5P0CJ88 424 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 DUX4L6P0CJ89 424 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 DUX4L7P0CJ90 424 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 CD28P10747 220 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 CD33P20138 364 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 DDOSTP39656 456 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 GPR4P46093 362 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 DLX1P56177 255 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 MAGOHP61326 146 aaKnown RBP10.92□□□□□ -0.66
COL1A1-209ENST00000495677 SLC36A3Q495N2 470 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 HCP5Q6MZN7 132 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 DUX4L9Q6RFH8 374 aaPredicted RBP10.92□□□□□ -0.66
COL1A1-209ENST00000495677 TBPL2Q6SJ96 375 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 ZNF730Q6ZMV8 503 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 DPY19L2P2Q6ZN68 376 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 RRM2BQ7LG56 351 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 OR6V1Q8N148 313 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 PNKDQ8N490 385 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 PIFOQ8TCI5 191 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 TLCD1Q96CP7 247 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 TSSK2Q96PF2 358 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 WNT10AQ9GZT5 417 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms