RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 NSD1Q96L73 2696 aaPredicted RBP7.43□□□□□ -1.22
ITGB1-217ENST00000494395 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.43□□□□□ -1.22
ITGB1-217ENST00000494395 TLN2Q9Y4G6 2542 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 IGHV1-69-2A0A0G2JMI3 117 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 PLSCR5A0PG75 271 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 DLGAP1O14490 977 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 MLNRO43193 412 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 SPRY3O43610 288 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 TLX2O43763 284 aaPredicted RBP7.42□□□□□ -1.22
ITGB1-217ENST00000494395 CD5LO43866 347 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 MT-ND5P03915 603 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 LCATP04180 440 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 LYNP07948 512 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 SLC2A1P11166 492 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 PRKXP51817 358 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 HCCSP53701 268 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 GABPB1Q06547 395 aaPredicted RBP7.42□□□□□ -1.22
ITGB1-217ENST00000494395 CARTPTQ16568 116 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 ZMAT1Q5H9K5 638 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 NKAPLQ5M9Q1 402 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 GLYATL3Q5SZD4 288 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 LCN1P1Q5VSP4 162 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 OR2T2Q6IF00 324 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 USP51Q70EK9 711 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 Q71RC1 249 aaPredicted RBP7.42□□□□□ -1.22
ITGB1-217ENST00000494395 OR5AS1Q8N127 324 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 RFLNBQ8N5W9 214 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 ZNF540Q8NDQ6 660 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 OR8G5Q8NG78 346 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 OR2AE1Q8NHA4 323 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 C1orf159Q96HA4 380 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 IL4I1Q96RQ9 567 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 SLC30A2Q9BRI3 323 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 SOX7Q9BT81 388 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 C9orf16Q9BUW7 83 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 RIBC2Q9H4K1 309 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 SAP30LQ9HAJ7 183 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 ADGRL4Q9HBW9 690 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 ZNF319Q9P2F9 582 aa7.42□□□□□ -1.22
ITGB1-217ENST00000494395 ANK3Q12955 4377 aaKnown RBP7.41□□□□□ -1.22
ITGB1-217ENST00000494395 H0YL77 283 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 WNT9BO14905 357 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 IL2RGP31785 369 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 SLC15A1P46059 708 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 SLC6A9P48067 706 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 CX3CR1P49238 355 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 RAD23AP54725 363 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 TMEM33P57088 247 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 ZNF121P58317 390 aaPredicted RBP7.41□□□□□ -1.22
ITGB1-217ENST00000494395 RPS7P62081 194 aaKnown RBP7.41□□□□□ -1.22
ITGB1-217ENST00000494395 ROM1Q03395 351 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 HNRNPA0Q13151 305 aaKnown RBP7.41□□□□□ -1.22
ITGB1-217ENST00000494395 TRIP10Q15642 601 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 ZSCAN26Q16670 478 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 TSTQ16762 297 aaKnown RBP7.41□□□□□ -1.22
ITGB1-217ENST00000494395 C21orf62-AS1Q17RA5 79 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 SLC25A30Q5SVS4 291 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 LRRN1Q6UXK5 716 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 GID4Q8IVV7 300 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 ZNF283Q8N7M2 679 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 OR8J1Q8NGP2 316 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 THEM6Q8WUY1 208 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 UBE2FQ969M7 185 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 EME1Q96AY2 570 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 ELMOD3Q96FG2 381 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 ZNF582Q96NG8 517 aaPredicted RBP7.41□□□□□ -1.22
ITGB1-217ENST00000494395 OPA3Q9H6K4 179 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 DCAF16Q9NXF7 216 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 IL19Q9UHD0 177 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 LRP12Q9Y561 859 aa7.41□□□□□ -1.22
ITGB1-217ENST00000494395 ZFHX3Q15911 3703 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 hCG_38984A0A1B0GV85 526 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 LRP5LA4QPB2 252 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 CD300LBA8K4G0 201 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 ANKRD65E5RJM6 399 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 H3BS24 57 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 XRCC2O43543 280 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 CDC14BO60729 498 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 SRSF10O75494 262 aaKnown RBP7.4□□□□□ -1.22
ITGB1-217ENST00000494395 IGLV3-1P01715 115 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 APOC1P02654 83 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 MRPL3P09001 348 aaKnown RBP7.4□□□□□ -1.22
ITGB1-217ENST00000494395 H2BFMP0C1H6 154 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 SBK2P0C263 348 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 SELEP16581 610 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 GABRB1P18505 474 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 HSD11B1P28845 292 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 HTR1FP30939 366 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 RBMXP38159 391 aaKnown RBP7.4□□□□□ -1.22
ITGB1-217ENST00000494395 GPR6P46095 362 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-217ENST00000494395 CDC42P60953 191 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 LMO4P61968 165 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 SNRPGP62308 76 aaKnown RBP7.4□□□□□ -1.22
ITGB1-217ENST00000494395 SUMO1P63165 101 aaKnown RBP7.4□□□□□ -1.22
ITGB1-217ENST00000494395 TNFAIP6P98066 277 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-217ENST00000494395 FAM3AP98173 230 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 MALLQ13021 153 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 TAF13Q15543 124 aa7.4□□□□□ -1.22
ITGB1-217ENST00000494395 ZIK1Q3SY52 487 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-217ENST00000494395 C6orf52Q5T4I8 152 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms