RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CASP9P55211 416 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 CTBP2P56545 445 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 ZP1P60852 638 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 SELENOWP63302 87 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 MRPS10P82664 201 aaKnown RBP7.2□□□□□ -1.26
HDAC6-234ENST00000493923 C17orf67Q0P5P2 114 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 FOXF1Q12946 379 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 PDZK1IP1Q13113 114 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 GANABQ14697 944 aaKnown RBP7.2□□□□□ -1.26
HDAC6-234ENST00000493923 LYPD4Q6UWN0 246 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 STAC2Q6ZMT1 411 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 TMPRSS11FQ6ZWK6 438 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 NUFIP2Q7Z417 695 aaKnown RBP7.2□□□□□ -1.26
HDAC6-234ENST00000493923 ATG4DQ86TL0 474 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-234ENST00000493923 LDLRAD3Q86YD5 345 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 MISPQ8IVT2 679 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 CLECL1Q8IZS7 167 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 COX18Q8N8Q8 333 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 CDRT4Q8N9R6 151 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 OR5D16Q8NGK9 328 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 OR2V1Q8NHB1 315 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 AKR7LQ8NHP1 331 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 SLC7A13Q8TCU3 470 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 CNOT9Q92600 299 aaKnown RBP7.2□□□□□ -1.26
HDAC6-234ENST00000493923 ARL11Q969Q4 196 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 SLC25A36Q96CQ1 311 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 RNFT2Q96EX2 444 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 TPD52L3Q96J77 140 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 SEC11CQ9BY50 192 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 NCOR1P1Q9H4R4 102 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 PTGES2Q9H7Z7 377 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 UBTD1Q9HAC8 227 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 PLEKHA1Q9HB21 404 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 NEUROD4Q9HD90 331 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 ZCCHC3Q9NUD5 404 aaKnown RBP7.2□□□□□ -1.26
HDAC6-234ENST00000493923 TAS2R16Q9NYV7 291 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 TAS2R5Q9NYW4 299 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 ABCA1O95477 2261 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 HIVEP2P31629 2446 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 IGHV3-15A0A0B4J1V0 119 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 KANTRA0A1W2PQU2 76 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 TSTD3H0UI37 97 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 FAAHO00519 579 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 SS18L1O75177 396 aaPredicted RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 RGS9O75916 674 aaPredicted RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 CD8BP10966 210 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 ZNF17P17021 662 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 ELK1P19419 428 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 PSMB1P20618 241 aaKnown RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 SFTPDP35247 375 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 LIMS1P48059 325 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 POU3F4P49335 361 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 CCR9P51686 369 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 CDH12P55289 794 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 C21orf58P58505 322 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 SNRPEP62304 92 aaKnown RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 RPS25P62851 125 aaKnown RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 EIF5AP63241 154 aaKnown RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 HBA1P69905 142 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 PLAURQ03405 335 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 SNTB2Q13425 540 aaKnown RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 COTL1Q14019 142 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 ZNF345Q14585 488 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 ZNF239Q16600 458 aaKnown RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 ZSWIM7Q19AV6 140 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 IDNKQ5T6J7 187 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 CPTPQ5TA50 214 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 ZNF660Q6AZW8 331 aaPredicted RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 OR2A2Q6IF42 318 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 CDC73Q6P1J9 531 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 GLDNQ6ZMI3 551 aaPredicted RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 IL34Q6ZMJ4 242 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 FAM214BQ7L5A3 538 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 CAMKMTQ7Z624 323 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 VTCN1Q7Z7D3 282 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 HMGN2P46Q86SG4 172 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 NAA40Q86UY6 237 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 SERPINA12Q8IW75 414 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 PUSL1Q8N0Z8 303 aaKnown RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 ZNF527Q8NB42 609 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 SYT14Q8NB59 555 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 OR52I1Q8NGK6 324 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 PHOSPHO1Q8TCT1 267 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 GPR119Q8TDV5 335 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 ABHD3Q8WU67 409 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 IGFBPL1Q8WX77 278 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 NEUROG1Q92886 237 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 ZNF775Q96BV0 537 aaPredicted RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 CMSS1Q9BQ75 279 aaKnown RBP7.19□□□□□ -1.26
HDAC6-234ENST00000493923 C1QTNF6Q9BXI9 259 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 TEX12Q9BXU0 123 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 ADAM19Q9H013 955 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 C12orf49Q9H741 205 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 ABRACLQ9P1F3 81 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 ICAM5Q9UMF0 924 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 PROCRQ9UNN8 238 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 CHST2Q9Y4C5 530 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 COL6A5A8TX70 2615 aa7.19□□□□□ -1.26
HDAC6-234ENST00000493923 RTTNQ86VV8 2226 aa7.18□□□□□ -1.26
HDAC6-234ENST00000493923 A0A087WZY1 265 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms