RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 PHB2Q99623 299 aa8.53□□□□□ -1.04
NPHP3-209ENST00000493732 CDX2Q99626 313 aaPredicted RBP8.53□□□□□ -1.04
NPHP3-209ENST00000493732 SLC6A7Q99884 636 aa8.53□□□□□ -1.04
NPHP3-209ENST00000493732 GAL3ST1Q99999 423 aa8.53□□□□□ -1.04
NPHP3-209ENST00000493732 ARL6Q9H0F7 186 aa8.53□□□□□ -1.04
NPHP3-209ENST00000493732 FXYD6Q9H0Q3 95 aa8.53□□□□□ -1.04
NPHP3-209ENST00000493732 SH2D2AQ9NP31 389 aa8.53□□□□□ -1.04
NPHP3-209ENST00000493732 PNRC2Q9NPJ4 139 aaKnown RBP8.53□□□□□ -1.04
NPHP3-209ENST00000493732 HS3ST3B1Q9Y662 390 aa8.53□□□□□ -1.04
NPHP3-209ENST00000493732 SESN1Q9Y6P5 492 aa8.53□□□□□ -1.04
NPHP3-209ENST00000493732 SPTBN5Q9NRC6 3674 aaKnown RBP8.53□□□□□ -1.04
NPHP3-209ENST00000493732 RER1O15258 196 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 FCER2P06734 321 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 HCKP08631 526 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 ZNF28P17035 718 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 SDHBP21912 280 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 CDAP32320 146 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 CASRP41180 1078 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 SUCLG1P53597 346 aaKnown RBP8.52□□□□□ -1.04
NPHP3-209ENST00000493732 MLF1P58340 268 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 MFAP5Q13361 173 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 HLXQ14774 488 aaPredicted RBP8.52□□□□□ -1.04
NPHP3-209ENST00000493732 PPA1Q15181 289 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 INPP5JQ15735 1006 aaPredicted RBP8.52□□□□□ -1.04
NPHP3-209ENST00000493732 GSG1LQ6UXU4 331 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 LYG2Q86SG7 212 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 NAA40Q86UY6 237 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 TMEM17Q86X19 198 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 BEST3Q8N1M1 668 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 STEAP2Q8NFT2 490 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 OR6K3Q8NGY3 331 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 SPTSSAQ969W0 71 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 RAB3CQ96E17 227 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 GPER1Q99527 375 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 ZPBPQ9BS86 351 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 TMEM59Q9BXS4 323 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 MFFQ9GZY8 342 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 CDCP1Q9H5V8 836 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 ZNF160Q9HCG1 818 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 SLC39A1Q9NY26 324 aa8.52□□□□□ -1.04
NPHP3-209ENST00000493732 NOP16Q9Y3C1 178 aaKnown RBP8.52□□□□□ -1.04
NPHP3-209ENST00000493732 TNRC6BQ9UPQ9 1833 aaKnown RBP8.52□□□□□ -1.04
NPHP3-209ENST00000493732 DNAH14Q0VDD8 3507 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 LOC101059948A0A1B0GTJ6 334 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 DHRS7CA6NNS2 312 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 ZNF814B7Z6K7 855 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 DHHO43323 396 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 STK17BO94768 372 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 IL2RAP01589 272 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 HLA-AP01891 365 aaKnown RBP8.52□□□□□ -1.05
NPHP3-209ENST00000493732 OPN1LWP04000 364 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 SLC25A4P12235 298 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 PRF1P14222 555 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 HIST1H3AP68431 136 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 CYCSP99999 105 aaKnown RBP8.52□□□□□ -1.05
NPHP3-209ENST00000493732 ZNF345Q14585 488 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 VAX1Q5SQQ9 334 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 HIST2H3PS2Q5TEC6 136 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 Q6ZSR3 168 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 HIST2H3AQ71DI3 136 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 FAM57BQ71RH2 274 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 MAML2Q8IZL2 1156 aaPredicted RBP8.52□□□□□ -1.05
NPHP3-209ENST00000493732 OR5AS1Q8N127 324 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 OR9K2Q8NGE7 335 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 OR52H1Q8NGJ2 320 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 OR13C8Q8NGS7 320 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 MITD1Q8WV92 249 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 C17orf50Q8WW18 174 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 S100A13Q99584 98 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 ZNF416Q9BWM5 594 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 SELENOIQ9C0D9 397 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 CHST6Q9GZX3 395 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 LPAR5Q9H1C0 372 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 AKIRIN1Q9H9L7 192 aaPredicted RBP8.52□□□□□ -1.05
NPHP3-209ENST00000493732 ZMAT3Q9HA38 289 aaKnown RBP8.52□□□□□ -1.05
NPHP3-209ENST00000493732 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.52□□□□□ -1.05
NPHP3-209ENST00000493732 MYEF2Q9P2K5 600 aaKnown RBP8.52□□□□□ -1.05
NPHP3-209ENST00000493732 NUP50Q9UKX7 468 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 ANAPC10Q9UM13 185 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 PCDHGA1Q9Y5H4 931 aa8.52□□□□□ -1.05
NPHP3-209ENST00000493732 PI4KAP42356 2102 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 ZIC3O60481 467 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 CDC14BO60729 498 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 CA11O75493 328 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 DHRS3O75911 302 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 OR2F2O95006 317 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 SIX6O95475 246 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 CRYZL1O95825 349 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 CFDP00746 253 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-209ENST00000493732 IGLV3-1P01715 115 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 P04436 131 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 CCL3P10147 92 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 HIST1H1DP16402 221 aaKnown RBP8.51□□□□□ -1.05
NPHP3-209ENST00000493732 ABOP16442 354 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 MGMTP16455 207 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 ZBTB25P24278 435 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 SRD5A2P31213 254 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 RAC3P60763 192 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 IL13RA1P78552 427 aa8.51□□□□□ -1.05
NPHP3-209ENST00000493732 MRPS34P82930 218 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms