RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SOHLH1Q5JUK2 328 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 DEFB128Q7Z7B8 93 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 GPBAR1Q8TDU6 330 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 SPACA7Q96KW9 195 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 HS3ST3B1Q9Y662 390 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 TGIF2-C20orf24A0A0A6YYL0 155 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 OR5H15A6NDH6 313 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 OR5H1A6NKK0 313 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 ZNF587BE7ETH6 402 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 SDCBPO00560 298 aaPredicted RBP10.42□□□□□ -0.74
HDAC4-210ENST00000493582 PHOX2AO14813 284 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 QDPRP09417 244 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 P2RY2P41231 377 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 FAM3AP98173 230 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 UBE2V2Q15819 145 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 COX15Q7KZN9 410 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 MFSD8Q8NHS3 518 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 ZNF524Q96C55 264 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 KTI12Q96EK9 354 aaPredicted RBP10.42□□□□□ -0.74
HDAC4-210ENST00000493582 G6PC3Q9BUM1 346 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 TCEAL2Q9H3H9 227 aaPredicted RBP10.42□□□□□ -0.74
HDAC4-210ENST00000493582 PTGES2Q9H7Z7 377 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 CRLF2Q9HC73 371 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 GDE1Q9NZC3 331 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 LSM5Q9Y4Y9 91 aaKnown RBP10.42□□□□□ -0.74
HDAC4-210ENST00000493582 LOC101059948A0A1B0GTJ6 334 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 MASP2O00187 686 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 OR6A2O95222 327 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 TXNDC12O95881 172 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 KNG1P01042 644 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 DANCRP0C864 163 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 VSIG8P0DPA2 414 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 G0S2P27469 103 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 ERVFRD-1P60508 538 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 EGR4Q05215 589 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 ELOBQ15370 118 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 IAH1Q2TAA2 248 aaPredicted RBP10.42□□□□□ -0.74
HDAC4-210ENST00000493582 TMEM52BQ4KMG9 183 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 C1orf100Q5SVJ3 147 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 ZNF385CQ66K41 422 aaPredicted RBP10.42□□□□□ -0.74
HDAC4-210ENST00000493582 GALNTL5Q7Z4T8 443 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 OR52N4Q8NGI2 321 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 PMM1Q92871 262 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 RAB11FIP5Q9BXF6 653 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 SLC5A6Q9Y289 635 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 LOC107986453A0A1B0GWG9 222 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 MEGF11A6BM72 1044 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 CYB5BO43169 146 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 PPP1CCP36873 323 aaKnown RBP10.41□□□□□ -0.74
HDAC4-210ENST00000493582 GABRA4P48169 554 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 ZP2Q05996 745 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 C4orf17Q53FE4 359 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 POMZP3Q6PJE2 187 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 RNF144BQ7Z419 303 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 CATSPERDQ86XM0 798 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 ZNF101Q8IZC7 436 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 APCDD1LQ8NCL9 501 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 OR10AD1Q8NGE0 317 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 LCN9Q8WX39 176 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 SH3BGRL3Q9H299 93 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 C19orf12Q9NSK7 152 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 HHLA2Q9UM44 414 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 LRP12Q9Y561 859 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 FREM3P0C091 2139 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 MPZL1O95297 269 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 SCGB1D2O95969 90 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 CISD3P0C7P0 127 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 SMIM10L1P0DMW3 83 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 SFTPCP11686 197 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 SERPINA2P20848 420 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 C5AR1P21730 350 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 TAGLN2P37802 199 aaKnown RBP10.41□□□□□ -0.74
HDAC4-210ENST00000493582 UCP2P55851 309 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 RPS15AP62244 130 aaKnown RBP10.41□□□□□ -0.74
HDAC4-210ENST00000493582 NKX6-1P78426 367 aaPredicted RBP10.41□□□□□ -0.74
HDAC4-210ENST00000493582 OR2T2Q6IF00 324 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 SLC18B1Q6NT16 456 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 CTHRC1Q96CG8 243 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 SMIM10Q96HG1 83 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 SPACA5Q96QH8 159 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 OR2A5Q96R48 311 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 KLHDC3Q9BQ90 382 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 ABHD6Q9BV23 337 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 SRMSQ9H3Y6 488 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 UNKLQ9H9P5 680 aaKnown RBP10.41□□□□□ -0.74
HDAC4-210ENST00000493582 MRPL22Q9NWU5 206 aaKnown RBP10.41□□□□□ -0.74
HDAC4-210ENST00000493582 RHBDD3Q9Y3P4 386 aa10.41□□□□□ -0.74
HDAC4-210ENST00000493582 ATXN7O15265 892 aaPredicted RBP10.4□□□□□ -0.74
HDAC4-210ENST00000493582 SLC16A7O60669 478 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 IFNA10P01566 189 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 ASAH2BP0C7U1 165 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 FSTP19883 344 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 S1PR1P21453 382 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 IGFALSP35858 605 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 GNALP38405 381 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 BIKQ13323 160 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 CBLN3Q6UW01 205 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 LYPD6Q86Y78 171 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 SLC39A11Q8N1S5 342 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 DTWD2Q8NBA8 298 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms