RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 TOR3AQ9H497 397 aa5.75□□□□□ -1.49
VPS52-219ENST00000493379 MED20Q9H944 212 aa5.75□□□□□ -1.49
VPS52-219ENST00000493379 UBTD1Q9HAC8 227 aa5.75□□□□□ -1.49
VPS52-219ENST00000493379 FAM118AQ9NWS6 357 aa5.75□□□□□ -1.49
VPS52-219ENST00000493379 PLEK2Q9NYT0 353 aa5.75□□□□□ -1.49
VPS52-219ENST00000493379 KIF17Q9P2E2 1029 aa5.75□□□□□ -1.49
VPS52-219ENST00000493379 WARS2Q9UGM6 360 aaKnown RBP5.75□□□□□ -1.49
VPS52-219ENST00000493379 LAMP3Q9UQV4 416 aa5.75□□□□□ -1.49
VPS52-219ENST00000493379 CMAHPQ9Y471 501 aa5.75□□□□□ -1.49
VPS52-219ENST00000493379 DSCAMO60469 2012 aa5.75□□□□□ -1.49
VPS52-219ENST00000493379 LOC100130705A0A1B0GUX0 176 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 TVP23AA6NH52 213 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 ACOD1A6NK06 481 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 H0YAE9 185 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 GPRIN2O60269 458 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 MPZL2O60487 215 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 DOK2O60496 412 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 GYPBP06028 91 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 CCL2P13500 99 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 HTR1FP30939 366 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 OPRL1P41146 370 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 PTH2RP49190 550 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 MMP15P51511 669 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 CDC42P60953 191 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 ADARB1P78563 741 aaKnown RBP5.74□□□□□ -1.49
VPS52-219ENST00000493379 MRPS11P82912 194 aaKnown RBP5.74□□□□□ -1.49
VPS52-219ENST00000493379 GALK2Q01415 458 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 SLC34A1Q06495 639 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 SNTB2Q13425 540 aaKnown RBP5.74□□□□□ -1.49
VPS52-219ENST00000493379 RCN1Q15293 331 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 TMEM255AQ5JRV8 349 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 Q5PR19 223 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 LPCAT4Q643R3 524 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 RGS7BPQ6MZT1 257 aaPredicted RBP5.74□□□□□ -1.49
VPS52-219ENST00000493379 CORO6Q6QEF8 472 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 DRAM2Q6UX65 266 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 Q6ZSR3 168 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 USP51Q70EK9 711 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 DPY19L4Q7Z388 723 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 DCXRQ7Z4W1 244 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 GID4Q8IVV7 300 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 STPG3Q8N7X2 389 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 OR10H5Q8NGA6 315 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 OR51L1Q8NGJ5 315 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 OR2AJ1Q8NGZ0 328 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 PPP1R35Q8TAP8 253 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 KLF14Q8TD94 323 aaPredicted RBP5.74□□□□□ -1.49
VPS52-219ENST00000493379 ASB17Q8WXJ9 295 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 APOBEC3DQ96AK3 386 aaPredicted RBP5.74□□□□□ -1.49
VPS52-219ENST00000493379 TRMT61AQ96FX7 289 aaKnown RBP5.74□□□□□ -1.49
VPS52-219ENST00000493379 PLEKHA8Q96JA3 519 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 ZNF582Q96NG8 517 aaPredicted RBP5.74□□□□□ -1.49
VPS52-219ENST00000493379 FOXN4Q96NZ1 517 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 SOX7Q9BT81 388 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 ABHD6Q9BV23 337 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 MRPL37Q9BZE1 423 aaKnown RBP5.74□□□□□ -1.49
VPS52-219ENST00000493379 OR51V1Q9H2C8 321 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 RERGLQ9H628 205 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 NIPAL2Q9H841 368 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 RNPEPL1Q9HAU8 725 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 CDH20Q9HBT6 801 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 SLCO1C1Q9NYB5 712 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 EIF3KQ9UBQ5 218 aaKnown RBP5.74□□□□□ -1.49
VPS52-219ENST00000493379 POU2F3Q9UKI9 436 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 STARD10Q9Y365 291 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 TMEM14AQ9Y6G1 99 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 HSPE1-MOB4S4R3N1 261 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 PMF1-BGLAPU3KQ54 211 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 ARFGEF3Q5TH69 2177 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 ABCA1O95477 2261 aa5.74□□□□□ -1.49
VPS52-219ENST00000493379 VWFP04275 2813 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 ZNF878C9JN71 531 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 ZNF254O75437 659 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 SRSF10O75494 262 aaKnown RBP5.73□□□□□ -1.49
VPS52-219ENST00000493379 TUSC2O75896 110 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 BAG2O95816 211 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 ABHD16AO95870 558 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 IGLV3-1P01715 115 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 IGHV4-39P01824 125 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 HLA-DQA2P01906 255 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 APOC1P02654 83 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 CD55P08174 381 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 SBK2P0C263 348 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 OR2T7P0C7T2 308 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 SLC15A1P46059 708 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 HTR5AP47898 357 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 EFNA4P52798 201 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 TPTEP56180 551 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 ISL1P61371 349 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 PPP1CBP62140 327 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 GRB2P62993 217 aaKnown RBP5.73□□□□□ -1.49
VPS52-219ENST00000493379 PSG7Q13046 419 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 IL18R1Q13478 541 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 APOFQ13790 326 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 ZNF718Q3SXZ3 478 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 TTC23Q5W5X9 447 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 OTPQ5XKR4 325 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 KRT80Q6KB66 452 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 NAA40Q86UY6 237 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 LRP11Q86VZ4 500 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms