RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 OTOGQ6ZRI0 2925 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 TRIM64CA6NLI5 447 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 ATP6V1G2-DDX39BF2Z307 99 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 H3BSH0 61 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 P2RY10O00398 339 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 NGFP01138 241 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 CELP19835 753 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 CDKN1AP38936 164 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 RAD52P43351 418 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 KIR3DL2P43630 455 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 UCP2P55851 309 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 BDH1Q02338 343 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 ACSM1Q08AH1 577 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 MALLQ13021 153 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 SNTB2Q13425 540 aaKnown RBP11.55□□□□□ -0.56
MSH6-208ENST00000493177 FDX2Q6P4F2 183 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 RFPL4BQ6ZWI9 263 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 ZNF101Q8IZC7 436 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 FBXL14Q8N1E6 418 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 OR52H1Q8NGJ2 320 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 OR5L1Q8NGL2 311 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 OR1J1Q8NGS3 322 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 OR5AK2Q8NH90 309 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 LILRB1Q8NHL6 650 aaPredicted RBP11.55□□□□□ -0.56
MSH6-208ENST00000493177 COG8Q96MW5 612 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 OPALINQ96PE5 141 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 TBCCD1Q9NVR7 557 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 PTTG3PQ9NZH4 202 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 FRRS1LQ9P0K9 344 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 NUFIP1Q9UHK0 495 aaKnown RBP11.55□□□□□ -0.56
MSH6-208ENST00000493177 STARD10Q9Y365 291 aa11.55□□□□□ -0.56
MSH6-208ENST00000493177 SIRT4Q9Y6E7 314 aaPredicted RBP11.55□□□□□ -0.56
MSH6-208ENST00000493177 HRNRQ86YZ3 2850 aaPredicted RBP11.55□□□□□ -0.56
MSH6-208ENST00000493177 A0A1B0GVI7 797 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 C5orf63A6NC05 138 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 SHISA9B4DS77 424 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 OGG1O15527 345 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 XRCC2O43543 280 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 INHBBP09529 407 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 JUNBP17275 347 aaPredicted RBP11.54□□□□□ -0.56
MSH6-208ENST00000493177 PCSK6P29122 969 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 CCR9P51686 369 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 PPP1CBP62140 327 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 GLYATL3Q5SZD4 288 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 SPATA46Q5T0L3 261 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 AGAP6Q5VW22 663 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 LIPKQ5VXJ0 399 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 VHLLQ6RSH7 139 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 PRSS57Q6UWY2 283 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 PRSS45Q7RTY3 260 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 BIVMQ86UB2 503 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 ELMOD2Q8IZ81 293 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 OR2AE1Q8NHA4 323 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 OR51E1Q8TCB6 317 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 RNF166Q96A37 237 aaPredicted RBP11.54□□□□□ -0.56
MSH6-208ENST00000493177 SMIM19Q96E16 107 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 REEP6Q96HR9 211 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 PDCD1LG2Q9BQ51 273 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 BCL2L14Q9BZR8 327 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 ZNF319Q9P2F9 582 aa11.54□□□□□ -0.56
MSH6-208ENST00000493177 TMEM212A6NML5 194 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 OR4C45A6NMZ5 311 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 H7C1Q1 480 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 TTRP02766 147 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 SOD3P08294 240 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 UBCP0CG48 685 aaKnown RBP11.53□□□□□ -0.56
MSH6-208ENST00000493177 CPEP16870 476 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 NR4A1P22736 598 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 ANOS1P23352 680 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 FABP6P51161 128 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 GP2P55259 537 aaKnown RBP11.53□□□□□ -0.56
MSH6-208ENST00000493177 ERVS71-1P61550 626 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 RPS23P62266 143 aaKnown RBP11.53□□□□□ -0.56
MSH6-208ENST00000493177 SYT6Q5T7P8 510 aaPredicted RBP11.53□□□□□ -0.56
MSH6-208ENST00000493177 TMEM244Q5VVB8 128 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 DMKNQ6E0U4 476 aaPredicted RBP11.53□□□□□ -0.56
MSH6-208ENST00000493177 RGS7BPQ6MZT1 257 aaPredicted RBP11.53□□□□□ -0.56
MSH6-208ENST00000493177 COLCA1Q6ZS62 124 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 MRPL21Q7Z2W9 205 aaKnown RBP11.53□□□□□ -0.56
MSH6-208ENST00000493177 KRTAP1-3Q8IUG1 177 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 RDH10Q8IZV5 341 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 SLC25A40Q8TBP6 338 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 GHSRQ92847 366 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 SGK3Q96BR1 496 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 FAM71F1Q96KD3 344 aaPredicted RBP11.53□□□□□ -0.56
MSH6-208ENST00000493177 TMED9Q9BVK6 235 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 POFUT1Q9H488 388 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 GSX1Q9H4S2 264 aaPredicted RBP11.53□□□□□ -0.56
MSH6-208ENST00000493177 GPR84Q9NQS5 396 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 TACC2O95359 2948 aa11.53□□□□□ -0.56
MSH6-208ENST00000493177 ARID1AO14497 2285 aa11.52□□□□□ -0.56
MSH6-208ENST00000493177 LOC107986453A0A1B0GWG9 222 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 J3QW42 95 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 CCRL2O00421 344 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 SYT7O43581 403 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 PLPP2O43688 288 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 GPRIN2O60269 458 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 ZFPL1O95159 310 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 DANCRP0C864 163 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 GCH1P30793 250 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms